| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0143 |
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| Symbol | |
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| ID | 8417947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 184324 |
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| End bp | 186147 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036708 |
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| Product | glucosamine/fructose-6-phosphate aminotransferase, isomerizing |
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| Protein accession | YP_003197023 |
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| Protein GI | 258404281 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.650527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGAA TCATTGGTTA TGCAGGTCAC CGTCCCGCTG TTCCGCTTTT GGTCGAAGGA
TTGCGCCGCC TGGAATACCG GGGATACGAC TCGGCCGGAG TGGCGTATCT CCAAAACAAG
GGCCTGCAAG TGGTCCGCGC CGAAGGGAAA CTCAAAAATC TTGAGCACTG CCTGACCGAA
TGCCAACACC TGCAGGCGAC TTGCGGCCTG GGGCACACCC GTTGGGCGAC ACATGGCCTG
CCGACGACCC AAAACGCCCA CCCCCACCAG GACGAAGGCC AGAACATCGC CCTGGTCCAT
AACGGCATTA TTGAGAATTT TCAGGAACTC AAGCAATCCC TCGAGGCCAA GGGGCACCAC
TTCGCCTCCC AAACAGACAC CGAGGTCATT GTGCACCTTT TGGCCGACAA TCTTGGCCAT
CAAAATACAT TGCCCAAAGC CCTGGCCGCG ACACTGCACC AGATCGAAGG GTCCTATGCC
CTGGCCTGCA TCCATCGCGA TTATCCTAAT GAAATCTGGG CTGCTCGCCA TTCCAGCCCC
CTCTTGCTGG GCGTGGGGCA GGGGGAAAAC TTCATCGCCT CGGATATTCC AGCGTTTTTG
AGCTCGACCC GGGATGTCGT GTTTCTCGAA GACGGCGAAG TCGTTCGTTT GACGCCCAAT
TCCTGGGAGG TCTTCAGCGC TGCGGACATG CAGCCGGTGG GCAAAACGCC GCAACGGATC
GAATGGGATC TTCAGGCAGC GCAAAAGGGC GGTTTCAAAC ACTTCATGCT CAAAGAGATC
ATGGAACAGC CCCAGGTCAT TCAAGACGGA ATCGCCGGGC GCATTGACGA CGCCACGCAG
GAGGTGGTCC TAGACGAGAT CGCCGATCTC CCGATTCCCG GGCGGTTGCA CATCATCGCC
TGCGGCACTT CATTCCACGC CGGTCTGTGG GCCAAATACC TCATTGAAGA ATGGGCCCGG
ATCCCGGTCC AGGTGGAGGT TGCTTCCGAA TTCCGCTACC GCCAGCAGGT CTTTCAGGAG
GGTGACCTGG CCCTGGCCAT CAGCCAGTCT GGAGAGACTG CCGACACCTT GGCGGGGATG
CGCATTGCGC GGGAGAACAA CCTGCCCATT GTGGGCCTGT GCAATGTGGT CGGATCCTCG
GTGGCCCGGG AATCCGACGG AACTATGTAC ACCCAGGCCG GTCCGGAAAT CAGCGTGGCC
TCGACCAAGG CCATGTGCTC GCAAATGGTG GCGTTGCTCC TGCTGGCCAT CGCCTGGGGG
CGCAAAAAAG GAACCCTCTC CGCTGAAGCG GCGCAGCAAC TCACAGGCCA ATTGCAACGC
TTGCCCCACA CTCTGAGCAC GGAACTCGAA CGCATGCGTC ATGCGGCCCA GCGGCTGGCC
ACCCAGTTCA GTAAAGCCAG GAGTTTCTTC TTCCTCGGAC GTGGCCTCGG ATCACCGCTT
GCCCTGGAAG GGGCCCTGAA GCTCAAGGAG ATCTCCTATA TCCATGCCGA AGGATACGCT
GCCGGAGAGA TGAAGCACGG CCCGATCGCC CTGATCGATT CGGAATTTCC GACATTCGCC
CTCGCTCCTC AAGACAGCCT GCTGCCCAAG GTCGGCTCCA ACCTCCAGGA GGTCCAGGCC
AGAGGGGGAA AGATCATCGC CCTGACCCAT CCCGGCACGG ACATCCCGAG CGATGAACGG
TGGGAGGTCC CGCAGATGGG CTCCGCTCTG GACAGTTTCC TGTTCTTGCC AGCCCTGCAA
CTTTTTGCCT ATGAAATGGC TGTATATCTT GGCAAAGATG TTGACCAACC GCGAAATCTG
GCCAAGAGTG TGACTGTCGA ATAA
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| Protein sequence | MCGIIGYAGH RPAVPLLVEG LRRLEYRGYD SAGVAYLQNK GLQVVRAEGK LKNLEHCLTE
CQHLQATCGL GHTRWATHGL PTTQNAHPHQ DEGQNIALVH NGIIENFQEL KQSLEAKGHH
FASQTDTEVI VHLLADNLGH QNTLPKALAA TLHQIEGSYA LACIHRDYPN EIWAARHSSP
LLLGVGQGEN FIASDIPAFL SSTRDVVFLE DGEVVRLTPN SWEVFSAADM QPVGKTPQRI
EWDLQAAQKG GFKHFMLKEI MEQPQVIQDG IAGRIDDATQ EVVLDEIADL PIPGRLHIIA
CGTSFHAGLW AKYLIEEWAR IPVQVEVASE FRYRQQVFQE GDLALAISQS GETADTLAGM
RIARENNLPI VGLCNVVGSS VARESDGTMY TQAGPEISVA STKAMCSQMV ALLLLAIAWG
RKKGTLSAEA AQQLTGQLQR LPHTLSTELE RMRHAAQRLA TQFSKARSFF FLGRGLGSPL
ALEGALKLKE ISYIHAEGYA AGEMKHGPIA LIDSEFPTFA LAPQDSLLPK VGSNLQEVQA
RGGKIIALTH PGTDIPSDER WEVPQMGSAL DSFLFLPALQ LFAYEMAVYL GKDVDQPRNL
AKSVTVE
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