Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0131 |
Symbol | |
ID | 8417935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 172603 |
End bp | 173073 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645036696 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003197011 |
Protein GI | 258404269 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000555257 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGTT TTAAAGTGGT TCCGTTGGAG AACTCGCCGG ATTATCTGGT CCTGCGCACG GCGATGCGCA TGAAGACCGC TTTGTACCGG ACCTTGTTCG GGTCCGGGCT CCGGGTCTCA CCGGAACAGT GGTCGATTCT CAATCGTTTA TGGGAAAAAG AGGGGCTGTG CCAAAGCGAA TTGGCAGAGA AGACGTCCCG GGATCGGCAT AATATGCACC GCATTCTGGG GCTGATGGAA AAAAACGGTC TCATCCGGCG CGAGCCGGAC CCCTTGGATA GCCGTCGATC GAATATTTTT CTGACCCAGC GGGGCCGGGA GATCAAGGAG GAGTTGGTGC CCCTGGTGGA GGATTTCGGG GACCAGGTGT TTGCCGGCCT CAGTGACGAG GAGGTCCGTC AGTTGTGGCG GTTGCACGAG CGCATTGGAT CCAACCTGGA GATTTTGGAA AAAGCCCAGG GCGGTGGTTG A
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Protein sequence | MARFKVVPLE NSPDYLVLRT AMRMKTALYR TLFGSGLRVS PEQWSILNRL WEKEGLCQSE LAEKTSRDRH NMHRILGLME KNGLIRREPD PLDSRRSNIF LTQRGREIKE ELVPLVEDFG DQVFAGLSDE EVRQLWRLHE RIGSNLEILE KAQGGG
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