Gene Dret_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0114 
Symbol 
ID8417918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp153117 
End bp153920 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID645036679 
Productfructose-bisphosphate aldolase 
Protein accessionYP_003196994 
Protein GI258404252 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 
TIGRFAM ID[TIGR01949] predicted phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTGG GAAAAGCCCT GCGATTAGAG CGGATTGTGA ATCGGAACAC CGGGCGGACG 
ATCATTGTGC CCCTGGACCA CGGCGTGACC GTGGGGCCCA TCTATGGGCT TGTCGATTTG
CGGGAAACAG TGGATAAAGT GGCTGAGGGC GGAGCGAACG CCGTACTGAT GCACAAGGGG
CTGGTCCGTT GCGGCCACCG GGAGCACGGC CGCGATGTCG GGCTGATCGT CCACCTCTCC
GCCAGCACCG CCCTGTCACC CTATCCGAAC GCCAAGACTC TGGTGGGGTC GGTCGAGGAT
GCCATCAAAC TTGGGGCTGA TGCGGTTTCC GTGCATGTGA ACATAGGGGA CGAATCGGAA
CGGCAAATGT TGTCCGATCT CGGCAATGTC TCGAGCCGGG CCGCTGAATG GGGTATTCCA
GTGCTGGCAA TGGTCTATGC CCGGGGGCCA AAGATCGAAA ACGAATTCGA TCCCCAGGTC
GTCGCCCATT GCGCCCGCCT CGGCGAAGAA CTCGGCGCTG ACGTGGTCAA AGTGGTCTAT
ACCGGGGATA TTGAAAGTTT TTCAAAGATT GTGGATGCCT GCTGTGTGCC GGTGGTTATA
GCCGGTGGCC CCAAGCTGGA AAATACCCGC CAGCTGGTGC AGATGGTCCA CGATTCCATT
GAAGCTGGCG GGGCCGGGCT CTCGGTCGGC CGGAACATTT TCCAGGCCGA AGCGCCGGAC
CGTCTGGTAC GGGCCCTGCA TCAGATTGTG CATGAGGATT ACAGCGTGGA ACAGGCCTTG
AGCCTGCTGG AAAGCGGCGA GTAG
 
Protein sequence
MHLGKALRLE RIVNRNTGRT IIVPLDHGVT VGPIYGLVDL RETVDKVAEG GANAVLMHKG 
LVRCGHREHG RDVGLIVHLS ASTALSPYPN AKTLVGSVED AIKLGADAVS VHVNIGDESE
RQMLSDLGNV SSRAAEWGIP VLAMVYARGP KIENEFDPQV VAHCARLGEE LGADVVKVVY
TGDIESFSKI VDACCVPVVI AGGPKLENTR QLVQMVHDSI EAGGAGLSVG RNIFQAEAPD
RLVRALHQIV HEDYSVEQAL SLLESGE