| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0113 |
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| Symbol | |
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| ID | 8417917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 151165 |
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| End bp | 152541 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036678 |
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| Product | ammonium transporter |
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| Protein accession | YP_003196993 |
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| Protein GI | 258404251 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTCAC GAAAAACTTC ACTTTGCAAA TCGAACGTGC TTCGCCCCTT GGCGTTTGCA
GCCGTTCTGG GGTTCGTGCC CACGATGGCC CTGGCGGCCG AGGCCCCATT AAGTCAGTTC
CACGGCAACA TCCTTTGGAC CCTGATCGCA GCCATCCTGG TCATGTTCAT GCAGGCCGGA
TTTGCCGCGG TCGAGGCCGG CTTCACTCAG GCCAAGAACG CGGGCAATAT TTTGATGAAA
AATGTGCTCG ACTTTTCCGC CGGCTCGGTC ATGTTCTTCT TTTTCGGATT CGCGCTGATG
TTCGGCACTG ATGTCGGCGG CCTTCTCGGC GGCAGCGGCT TCGCCCTCGG CGGCGTCGAC
GCCACCTCTC CTGACGGACA GTGGACATTG ACCTTCTGGT TTTTCCAGTC TGTTTTTGCC
GCCACCGCCG CGACCATCGT CTCCGGGGGC GTCGCTGAGC GCACCAAATT TCCGGCCTAT
ATCCTGATCA GCATCATTGT GACCGGTTTG ATCTACCCCA TCTCCGGACA CTGGGCCTGG
GGCAGCCTCT GGCTTGGTGA CGCTGGTGCG GGTTGGCTGG AAAGTCTCGG CTTCGCAGAT
TTCGCCGGGT CCACAGTGGT CCATTCGGTA GGGGCCTGGA TCGCCCTGGC CGGGGCCATC
GTAGTCGGTC CCCGTTTGGG CAAATACACC AAGGACGGAA CCGCCCGGGC CATCCCCGGC
CACAACATTC CTCTGGCCGG TCTGGGTGTG TTCATCCTCT GGTTCGGCTG GTTTGGTTTC
AATCCCGGCT CCACAACCAC GGCTGACGGC ACCATCGGCT ACATCGCGGT CAATACGAGT
CTGTCCGCCG GCACCGGGGC GCTGGGCGCC ATGATCATGG CCTGGCTGCG TTTCGGCAAA
CCGGACGCGA CCATGAGCCT GAACGGCATC CTCGCCGGGC TCGTGGGTAT CACCGCCGGC
TGTTACGAAC TCTCCCCCAT CGGCGCCATG ATCGTTGGGC TCGGATCCGG TATCCTGTGT
ATCCTGTCCG TGGAATTCAT CGACAAAGTC TTGAAGGTCG ACGACCCGGT GGGCTGCGTC
TCCGTCCACG GCACCTGCGG CGCTTTCGGA ACCTTGTGTG TCGGTCTTCT GGCCGCACCT
GGATACGGTG GACTGACCGG GCTGTTCTAC GGCGGCAGCA TCAATCTCCT GGGCATCCAG
GCCTTGGGTG TCGCCTCGGT CTTCGTCTGG GCCTTCGGCG TTGGTTTTAT GGCCTTCAAA
GGAGTTGACG CCCTTATCGG CATCCGCGTC GATGAAGACG AAGAACGCAA GGGCCTGGAT
ATCACGGAAC ACGGCATGGA ATCCTACAAC GGCTTCCAGA TCTTCAGCAC CGAGTAA
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| Protein sequence | MRSRKTSLCK SNVLRPLAFA AVLGFVPTMA LAAEAPLSQF HGNILWTLIA AILVMFMQAG
FAAVEAGFTQ AKNAGNILMK NVLDFSAGSV MFFFFGFALM FGTDVGGLLG GSGFALGGVD
ATSPDGQWTL TFWFFQSVFA ATAATIVSGG VAERTKFPAY ILISIIVTGL IYPISGHWAW
GSLWLGDAGA GWLESLGFAD FAGSTVVHSV GAWIALAGAI VVGPRLGKYT KDGTARAIPG
HNIPLAGLGV FILWFGWFGF NPGSTTTADG TIGYIAVNTS LSAGTGALGA MIMAWLRFGK
PDATMSLNGI LAGLVGITAG CYELSPIGAM IVGLGSGILC ILSVEFIDKV LKVDDPVGCV
SVHGTCGAFG TLCVGLLAAP GYGGLTGLFY GGSINLLGIQ ALGVASVFVW AFGVGFMAFK
GVDALIGIRV DEDEERKGLD ITEHGMESYN GFQIFSTE
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