| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0110 |
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| Symbol | |
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| ID | 8417914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 147675 |
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| End bp | 149789 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036675 |
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| Product | AsmA family protein |
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| Protein accession | YP_003196990 |
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| Protein GI | 258404248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTGGA AAAAAATAAC AGCAATTGTA TTGGGAGTGA TTCTTCTGGT GGTGGTCGGA
GCTGCCGTCT TTCTTGTCAC CTATGACTAC AACGCCCTCA AGCCGCAAAT TGAGGCCGCG
GTTGAGAAAA ACACGGGCCG CAAATTGACC TTGGACGGGG ATATCTCCCT GGCCCTCGGA
CTGACCCCGG CCCTGGTGGT CGAGGATGTC TCCCTGGCCA ATGCGCAATG GGGATCGAAG
CCGCAGATGC TTGAAGTGGG CCGCTTTGAA CTCCAGGTGG CCTTGCTGCC CCTTTTTCAG
CGCAACGTGG AGATCCAGCG TGTTGTCCTC CGGGACACCT CGGTTCTCGT GGAGACGAAT
ACACAGGGTG TTTCCAATCT GACGCTGCAC AAACCGCAGG CCGCAGCTGA ACCCGAGCAG
GAAACCAGCC CCGAAGCGCC AAGCGATGCT GCTTCCCAAA AGGGCCCTCT GCCCGGATTG
GAACTCGACA ATGTTCTTGT GGAAAACGGG TCCATTGATG TGCGCGACGC TGCTGGTGAA
ACCGTGACCT CCTTCTCGGT GCAGCGTCTG GCGTTGCAGA CCCTGCCCAA TAAAGACGTC
CAAATGACGT TTGACGGCCA GTTCAATGGT CAGCCGCTTT CGATGAGCGG CACCGTCGGT
CCCCTGCAGG GACTGACCGA TGCCCAGCAG CAATGGCCCG TTGATCTTGC CGTGCAATCC
GGTTCGGCTT CTGTTGCTTT GGAAGGAGCT ATTCGGGACG TCTTCGCCCA GCGTGGCCTG
GATCTGGACC TTTCGGCGAC GATTCCCGAG CCAGCGGCCC TGAAGCCGCT TGTTGGCCAG
GAGATTCCGG TGGCCGGGCC CATCGAGTGT ACAGCCACGC TGACCGACAC CGCGGCAAAA
ACGTTTCGCC TCGACTCCTT GCAGGTGCGG CAAGGGGAAA ATCGCTTGAG CGGCACCGTT
TCCCTCGCTC TCGGACCGCC CCTTTCAGTG ACCGCGGATT TGACCAGTCC GCTTCTGGAT
GTGACCGCCA TCACCACCCA GCCTTCTGGC GATACCGCAC CTCCTCAGGA GCAACAGGGG
GCTTCGTCCG CCGCCGGCGA CCAGCGCGTG TTTCCGGACA CAGAACTGCC GTGGGAGGCG
CTCAGGCAGA TCAATGCCCA ATGTTCCCTC CAGGTTGGGA CGCTGGTTAT CCCCAAATTG
CAGCTTGTTG ATACCCAGCT GGAACTCGGC TTGAAAGATG GTCTGCTCAC TCTTTCCCGT
TTGACGGCCC GCTCCGGCGC CGAAGGGACG TTGAACGCCA CAATGACAGT GGACGCCCGT
TCCAAGCAGC CGCGGCTGGA ATGTGCGGCA CGGATCGAGC ATTTTGCCCT GGAGCAGGTC
CTGCGGGAAA CGAAATCCGA CAGTTTCCTC CAGGGCACGG TGAGTACCGA CTTGGCGGTC
ACCGGACAGG GCCGTTCCGT GGCAGCGATC ATGGCCGGTC TGGACGGCAA GTTGCAGGCG
AGCATGAGCG AGGGCCGGCT GGCGAATGCG AGGCTTGAGA AGTGGGGCGC TGATCTGGGA
GCGAGTCTGT TCCGTCTCCT GAATCCGCTG GAAGAGCGCG GACGATTTAC CCCCATCCAA
TGCGCTGTTC TTGTCGTGCC GATCGATTCC GGACTGGCCC GGGTGCAGGC CTTGGTCGTG
GATACGCCGC GCATGCTCCT GCGGGGACAG GGATCCGTCA ATCTGCGCAC AGAAGCCCTG
GATATCGGGC TGGATCCGCA GCCCAAGGAA GGATTGCAGA CCGGGGTTCT GGGCAAGTTG
AGCCTCAGCT TCAGCGAACT GGCCCAGGCC TTCCGCCTCG GGGGGACCTT GGCCAAGCCG
TCATTGGCGT TGGACAAGAC GAAAACGATC GAGACCTTGG GCAAAGGCAT CGGCGGGACA
CTGCTCTTTG GTCCGGCCGG GGCCGCTGCA GGGCTGCTGG GTTCCAGCGA TACGTCCGAC
AATCCGTGTC TGCAAGCCCT GGAGGGGGCG GATGCTGCCC AAGAGCAGCA GGCAGAAAAA
CCCTCCTCGC CCCAGGAGCA AGTGGAAAAA GGGCTCGAAG ATTTGGGCGG TAAACTGCAA
AAGCTCTTTG AGTGA
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| Protein sequence | MGWKKITAIV LGVILLVVVG AAVFLVTYDY NALKPQIEAA VEKNTGRKLT LDGDISLALG
LTPALVVEDV SLANAQWGSK PQMLEVGRFE LQVALLPLFQ RNVEIQRVVL RDTSVLVETN
TQGVSNLTLH KPQAAAEPEQ ETSPEAPSDA ASQKGPLPGL ELDNVLVENG SIDVRDAAGE
TVTSFSVQRL ALQTLPNKDV QMTFDGQFNG QPLSMSGTVG PLQGLTDAQQ QWPVDLAVQS
GSASVALEGA IRDVFAQRGL DLDLSATIPE PAALKPLVGQ EIPVAGPIEC TATLTDTAAK
TFRLDSLQVR QGENRLSGTV SLALGPPLSV TADLTSPLLD VTAITTQPSG DTAPPQEQQG
ASSAAGDQRV FPDTELPWEA LRQINAQCSL QVGTLVIPKL QLVDTQLELG LKDGLLTLSR
LTARSGAEGT LNATMTVDAR SKQPRLECAA RIEHFALEQV LRETKSDSFL QGTVSTDLAV
TGQGRSVAAI MAGLDGKLQA SMSEGRLANA RLEKWGADLG ASLFRLLNPL EERGRFTPIQ
CAVLVVPIDS GLARVQALVV DTPRMLLRGQ GSVNLRTEAL DIGLDPQPKE GLQTGVLGKL
SLSFSELAQA FRLGGTLAKP SLALDKTKTI ETLGKGIGGT LLFGPAGAAA GLLGSSDTSD
NPCLQALEGA DAAQEQQAEK PSSPQEQVEK GLEDLGGKLQ KLFE
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