| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0108 |
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| Symbol | |
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| ID | 8417912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 143518 |
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| End bp | 146619 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645036673 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_003196988 |
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| Protein GI | 258404246 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.153145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG CCTCCTTCTC CGTGCGCAAT CCGGTGTGTA TCAATCTGAT CATGGCCACG
ATTCTGATCA TGGGCGTGGT CCTGTATGTG ACCAGGATGC CGAAGGAGAT TTTCCCGGCC
TTTTCGCAGG ATATTATCCA GGTGACGACG GTCTACGGAG GGGCCTCGGC CCGGGAGATG
GAGAAAAATG TCTCCATGAA GATCGAGGAT GCGTTCGCGG ACCTGGAAGA TATTGAGGAC
ATCTTTTCCA CTTCTCAGGA AGGACGGAGC ACGGTCCGGC TTGAAGTCTC GAAAGAGGTC
TCGAATACCG CCAAACTGCT CAACGATGTC CAACAGGCCA TCGACCAGAT CGACGATCTA
CCGGAAGACG CCGAAGACCC GGTGGTCCAG GAACTCGATT CCGATCTGCC CATCATCACG
GTCTCCCTCT ACGGGGGGAT CAATCTTCTG GAACTGGAAC GCCTTGTCGA GGATCTAGAG
GACGCCATCG CCGCAGTGCC TGGCGTGGCC AATGTCAATC GCAGCGGCCT GCCGGAGCGG
GAGGTCTGGG TCGAGATCCG GCCGGAAACC ATCAAGCAAT ATAAGCTCAC CCTCCAGGAT
GTCACACGCA TTCTCGACGC ACAGAATTAC GATCTGCCTG GGGGGACAAT GGACACCACC
GAGGGAGCCT ATCTGCTGCG GACCAAGGGC AAGGCGGCCA CGTTGGAAGA CTTGCGAGAG
ATTGTCGTGG CCACCGGCCC CAACGGGGGG CAGGTGGTCC TGGACGACAT CGCCACCTTG
CGGGACTGGT TCGCTGACAA ATCCACCCTG GGACGGTTCA ATCGGCAGCG GGCCATCAAT
CTCAGCGTTT TTAAAAATGA CGACGGCGAC GCCATCAAGA TCACTCAGGC GATCACGGAA
GTGACCGAGC GGTTCGAGGG CCAACTGCCC CCGACGGTGC AAATCGGCCT GTTCAACGAT
CTCTCCGTGT ATATCAAAAA CAGGCTTGAT GTCCTGAAAA CCAGCGGTTT TCAGGGGCTG
ATCGTTGTTT TCATTTTGCT GCTATTGGCC CTGAATACCA GGGTGGCGGG ACTGGTTACC
CTCGGCATTC CGGTGTCTTT TCTTGGGGCG ATTGTCCTGA TGTACTATGT CGGCATGACG
ATGAACATGA TCGCCATGTT CGCTCTGATT GTTGTGCTGG GACTCGTCGT GGATGACGCC
GTGGTGATCG GGGAGAATGT TTACCGGCAT TACGAGCAGG GGCTTTCTCC GGCGGAGGCG
GCTGTGCGCG GGGCTTCAGA GGTGTCCTGG CCCGTGGTTT CCGCCGTGGC TACGACCATA
GCCGCCTTTT TACCCATGTT GCTCATCCCC GGAACTATGG GCGTTTTTTT GGGGGTGATC
CCCAAAGTGG TCACCTTTGC CCTCCTGGTT TCGCTGCTGG AGGCCTTGGT CATTTTGCCC
TCGCACTTGG CGGAATTTTT GCCGGCGCGG CCGAAGCCGC CGTCGCGCCT GCGCCGGAAA
CTCAATGCGG GGGTGGATAG TGCGATTGAT GTCTACGGCA GGTTCTTGGA TCTGGTGCTT
GAATGCCGCT ATGTCTTTTT GACAGCGGTG ATCAGTTTCA GCGCGGTTTT AATCGTATAC
AGTGCGGTCC ATCTGCCGTT TATTCTCTTT GGCGAGTTCG AGGGAGCCCA ATTTTACGTC
AACGTCGAAT GCCCACTGTC CTTTTCTCTG GAAGATACCG AAGAGTATAT CAAGCAAGTC
GAAGAACGCT TAGCAGAGAC GATACCCGAG GCGGAACTTA TTTCACTGGT GACCAATGTC
GGCACGATTA TGGATGACAT GGACAGCTTT CGTTCTGGGC CTCATCTGGG CCAGATCATT
GTTGAACTCA AGGAGTTTGG AAAGGGGCGA GACAGGCCGA TCAAAGTTGT CAGTTCCGAT
GTGCGCGATG CCCTTGCGGA TCTCCAGCGC GGTGGACGGC ACATCGAAGT CCAGGAACTC
CAGAGCGGTC CCGGAGGCAA GCCGATTTAT ATCCTGGTGA CCGGGCCGCG TCTTGACGTA
TTGCAGGAAA TTTCCTTTGA GATTCAGAAT TTTGTGAGTC AGATTCCAGG GGTGCGCGAT
TTGAGCGACA ATCTGGAGCC GGGCAAAACC GAGTTTCAGG TCGAACTGAC CCCCTTGGCC
CGGACGCTGG GGCTCAGCGA ACGGGATGTG GCCTGGCAGT TGCGTTCAGG ATTCGCAGGC
ATCGCCTCCA CGACGAGTAT GCAGAGCGCG GCTGAAGATA TTGATATCCG GGTCCGCTTC
CCGGAAGCCG TGGCAGATCG GGTGGAAACC TTGTACCGCA TGCATCTGCG GCTCCCCGGC
GGGGAGTTGG TTCCGTTGTC CGAGGTGGCC CGCGTGGCTC CGGTGCGGGG CGAGAGCGCT
ATTTTACGGG ACAACGGACA GCGCTCCGTG GCCATCACTG GTGATCTGGA CCAGGCCAAG
ACCACGGCGT CGGATGTCGC CCAGGCCGTG CAGGACCGTT TTGGCGATGT CGCGGAACGC
TTCCCCGGAT ACCGTCTGAC CACGCAGCGT GGTGAAGTCC AGGATATCAA CCGCTCCATG
ACGGCGCTCA AGTTCGCCTT TTTATTGGCC CTGTTCCTGA TCTATTTTAT TCTGGGAACC
CAGTTCCGGT CCTATGTTCA GCCGCTTATC GTCATGGCCG CCATCCCTTT GGGCATAGAC
GGTGTTTTGC TGGGCCATAT CCTGACCGGC AAACAATTGG GGATCTTGTC CATGATCGGA
CTTGTGGCGC TTTCTGGTAT TGTGGTCAAT GATTCACTGG TGCTGGTCGA TTTCGTCAAC
CGCTTGCGCA GGCAGGGCCA GGACCGACGG AGTTCTCTGG TTCAGGCCGG GATGATCCGG
TTTCGCCCGG TGCTTCTGAC GTCGTTGACA ACGATGGGCG GGCTCTTTTT CCTGGCCTTT
TTGGCCAAAG GGCAGGCCCA ATTTCTATCG CCGATGGCCG TGTCCATCTT TTTTGGACTC
ATGATGGCTA CACTCATTAC CTTACTCGTG GTTCCGGCCA TGTATTCGGT GACCGATGAT
ATCGCTTTGC ATTTTCGGCG CCGGCGGAAG GGGACGGTAT GA
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| Protein sequence | MNLASFSVRN PVCINLIMAT ILIMGVVLYV TRMPKEIFPA FSQDIIQVTT VYGGASAREM
EKNVSMKIED AFADLEDIED IFSTSQEGRS TVRLEVSKEV SNTAKLLNDV QQAIDQIDDL
PEDAEDPVVQ ELDSDLPIIT VSLYGGINLL ELERLVEDLE DAIAAVPGVA NVNRSGLPER
EVWVEIRPET IKQYKLTLQD VTRILDAQNY DLPGGTMDTT EGAYLLRTKG KAATLEDLRE
IVVATGPNGG QVVLDDIATL RDWFADKSTL GRFNRQRAIN LSVFKNDDGD AIKITQAITE
VTERFEGQLP PTVQIGLFND LSVYIKNRLD VLKTSGFQGL IVVFILLLLA LNTRVAGLVT
LGIPVSFLGA IVLMYYVGMT MNMIAMFALI VVLGLVVDDA VVIGENVYRH YEQGLSPAEA
AVRGASEVSW PVVSAVATTI AAFLPMLLIP GTMGVFLGVI PKVVTFALLV SLLEALVILP
SHLAEFLPAR PKPPSRLRRK LNAGVDSAID VYGRFLDLVL ECRYVFLTAV ISFSAVLIVY
SAVHLPFILF GEFEGAQFYV NVECPLSFSL EDTEEYIKQV EERLAETIPE AELISLVTNV
GTIMDDMDSF RSGPHLGQII VELKEFGKGR DRPIKVVSSD VRDALADLQR GGRHIEVQEL
QSGPGGKPIY ILVTGPRLDV LQEISFEIQN FVSQIPGVRD LSDNLEPGKT EFQVELTPLA
RTLGLSERDV AWQLRSGFAG IASTTSMQSA AEDIDIRVRF PEAVADRVET LYRMHLRLPG
GELVPLSEVA RVAPVRGESA ILRDNGQRSV AITGDLDQAK TTASDVAQAV QDRFGDVAER
FPGYRLTTQR GEVQDINRSM TALKFAFLLA LFLIYFILGT QFRSYVQPLI VMAAIPLGID
GVLLGHILTG KQLGILSMIG LVALSGIVVN DSLVLVDFVN RLRRQGQDRR SSLVQAGMIR
FRPVLLTSLT TMGGLFFLAF LAKGQAQFLS PMAVSIFFGL MMATLITLLV VPAMYSVTDD
IALHFRRRRK GTV
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