Gene Dret_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0105 
Symbol 
ID8417909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp140473 
End bp140922 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID645036670 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003196985 
Protein GI258404243 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.983875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAG ACAAAGAATT CCTTTTAGAG GACTCGCCGG GCTTTCTGCT CAACCGCACC 
GCGCTGCGGA TCAAAAAGGA TTTCCAGCGG CGCATTTCCG CAGCCGAGCT CGATGTCACG
GCCGAGCAAT GCGCAGTTTT GTGGAGTTTG TGGCGCCGGG AGGGGTGTTT CCAGCGTGAG
TTGGCGGAAC AGACCTTTAA GGATATCACC AATATCACCC GCATCCTGGA CGGTCTGGAG
CGCCGCGGCA TGGTCAGGCG CGTTCGCGAT GAACACGACC GCCGGATGAG CCGCGTGTAT
CTGACCGAGC AGGGCACAAG TTTGCAGGAT AAGATTACGG CCATTGCCAG CGAACTGGGG
CGCGACGCCT ATCAGGGTAT TGACGAGAGC GACCTGCAAG AATTGCGGCG AGTATTGAAT
CTGGTTTACG CGAATTTAAG CGACGCTTGA
 
Protein sequence
MYEDKEFLLE DSPGFLLNRT ALRIKKDFQR RISAAELDVT AEQCAVLWSL WRREGCFQRE 
LAEQTFKDIT NITRILDGLE RRGMVRRVRD EHDRRMSRVY LTEQGTSLQD KITAIASELG
RDAYQGIDES DLQELRRVLN LVYANLSDA