| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0104 |
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| Symbol | |
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| ID | 8417908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 138947 |
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| End bp | 140266 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645036669 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_003196984 |
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| Protein GI | 258404242 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.881453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGG TTGTGCTATT CACATTCGCG TTGCTCACAC TGAGTTTTTC CACAGCCAAC
GGCGCCGGCT TCGCCACGTA CGAGTGGAGC GCCCGCGGCA ACGCTCTCGG CGGCTCCGTA
GTCGGTATGG CCGACGATCC GGCCGCGGTG GCGTCCAACC CAGCCGGTAT CACCCAACTC
GAGGGCGGCC ACGGCCTGTT TGGCCTGACA GCCATTTATC CCCAGGCCGA GGTGACCACG
AAACCCCAAG GGGGACCTGA ACAAACCACC AGCGGCGAAG ACAATATCTG GACCCTGCCC
CACGCCTATT ACACCCGCCA GCTCTCCGAC CGCTACTGGC TCGGCCTCGG CGTGTTCACC
CGCTTCGCCC TGGGCACAGA ATACCACGAC GACTGGCCCG GCCGTTACAA CACCCGCTAC
ACCGGCATCA AGACCGTCTC CTTCAATCCC AACCTGGCCA TGAAACTCAC GGACACGGTC
TCTCTGGCCG TGGGCGTTGA AGTGATGCAT ATGGATTTCC AGCAGCGGAA AGTTAAGGAC
GCCTCAGCTT TGGCAGGACA AAAAACTGAT CCTGAAACAA CCACATACGA CTTTAGCGCT
GACCTTAATG GTCAAAGTCA AGGTGTTGGA TTTAATATCG GTTTACATTA CAAGCCCCTG
GATTGGATCC AAGCCGGGAT TATCTACCGC AGTCCGGTAG ATCAAAAAGT GGAAGGGGAG
GTTAACTTCG ATCGGTCTAA TTTATCTAAG TTAACAGCCA TTAATCCAGC ATATGGTGGT
TCTTTTCAAG ACATGGATGC ATGGGGAGAG ATCACCTTAC CCGACAGTTT TCAGGCCGGC
ATAGCCTTTA ATCTTACCCA AAAGCTGACT GTGGAAGTGG GTGGAGCTTA CACCTTTTGG
AGCAAATACG ACGAATTGAC TTTCAATTAC GAAAAACCTG TGATCTCAGT CAAACCTTCT
TCAGATACAT CAACTACCCC AAAAAGCTGG GAAGACACTT GGCGATTCAA TATCGGCGCG
GAATACGCCG TGACCCCGTG GTGCGATCTG CGGGCCGGGT ATGTCTACGA CCAGTCTCCT
GTTCAGGATG AATACGCCGA TTATCTCATC CCGGCTGATG ACCGCCAGAT CTTCTCCTTT
GGCACCGGCT TCGCCCTGAA CGAGCAATGG ACCCTGGATC TTTCCTACAA CTACATCATG
ATCCAAGATC GGACCGTTGA TTACGACGAA GTACGCGTCG AAGACGAAGG CGTCTACGCT
GCGGAATTCG ACAACGCCAA CGCCCACATG GTCGGCATGA GCCTCGGCTA CGAATTCTAA
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| Protein sequence | MRKVVLFTFA LLTLSFSTAN GAGFATYEWS ARGNALGGSV VGMADDPAAV ASNPAGITQL
EGGHGLFGLT AIYPQAEVTT KPQGGPEQTT SGEDNIWTLP HAYYTRQLSD RYWLGLGVFT
RFALGTEYHD DWPGRYNTRY TGIKTVSFNP NLAMKLTDTV SLAVGVEVMH MDFQQRKVKD
ASALAGQKTD PETTTYDFSA DLNGQSQGVG FNIGLHYKPL DWIQAGIIYR SPVDQKVEGE
VNFDRSNLSK LTAINPAYGG SFQDMDAWGE ITLPDSFQAG IAFNLTQKLT VEVGGAYTFW
SKYDELTFNY EKPVISVKPS SDTSTTPKSW EDTWRFNIGA EYAVTPWCDL RAGYVYDQSP
VQDEYADYLI PADDRQIFSF GTGFALNEQW TLDLSYNYIM IQDRTVDYDE VRVEDEGVYA
AEFDNANAHM VGMSLGYEF
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