| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0102 |
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| Symbol | |
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| ID | 8417906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 137214 |
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| End bp | 138083 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645036667 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003196982 |
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| Protein GI | 258404240 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.734078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA TCCTCGCTAT CCTTACCGCC GCCGCCCTTT GGGGGCTGAT CGGACCGTTG
GCCAAATACG CCTTTGCTCA CGGCTTCACG CCCATGGAGG TCGCCTTCTG GCGGGCGGCC
CTGGCCTGGG GCTTTTTCGC CACCCACGCC GGTCTGCGCG GACAACTCCG CATCCAGTGG
CGCGACCTCG GCCCGACAAT CGTCTTCGGT TTTTTTTCAG TCAGCGTTTT TTTCGGCGCC
TACCAGGTCG CTGTCGCCCG CAGTGGCGCC GCCGTGGCCG CAGTGTTGCT CTACACCGCG
CCCTCCTGGG TCGCGCTGCT CTCCCGTCTG CTGTTCAGTG AGGCCCTGAC CCCTATCAAA
CTCGCGAGTA TCGCCCTGTC CACCCTGGGA GTGGCGGCCG TGGCCTTTGG CCGCGCCGAT
CTCGGGCCGG TCAACCTGGA CTGGATCGGC GTCACCGCAG GACTTACCGC TGGCCTGACC
TACGCCATCT ATTACATTTT CGGAAAACAC TACCTCGGCA GCTACCCCTC AGGCACCTTG
TTCTTCTATG CCCTGCCCGT TGGGGCCTTC TTTCTCTGGC CTCTGGCCGA TTTCGGATAC
CATCCCTTTC CGGCCTGGCT GGCCGTCGGG GCCATCGCCT TTTTCTCGAC CTACCTCGCC
TACGCCATCT ACTGCCACGG GCTGAAGCGC CTCCAACCCG CCCGCGCTGC GGTCCTGGCC
ACCTTTGAAC CGGTGGTAGC CGCGATTTTG GCCGTGATCT GGTGGGGCGA ACGGTTTACA
CTGCTGGGCA TCATCGGCGG GCTGTGCATT GTCGGCGGCG TCGTCTGGAT GAGCTGCGCC
AGAGAGCCTG GGCCGAAGAG TCGCCACTGA
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| Protein sequence | MSGILAILTA AALWGLIGPL AKYAFAHGFT PMEVAFWRAA LAWGFFATHA GLRGQLRIQW
RDLGPTIVFG FFSVSVFFGA YQVAVARSGA AVAAVLLYTA PSWVALLSRL LFSEALTPIK
LASIALSTLG VAAVAFGRAD LGPVNLDWIG VTAGLTAGLT YAIYYIFGKH YLGSYPSGTL
FFYALPVGAF FLWPLADFGY HPFPAWLAVG AIAFFSTYLA YAIYCHGLKR LQPARAAVLA
TFEPVVAAIL AVIWWGERFT LLGIIGGLCI VGGVVWMSCA REPGPKSRH
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