| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0100 |
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| Symbol | |
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| ID | 8417904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 135040 |
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| End bp | 136242 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036665 |
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| Product | cysteine desulfurase NifS |
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| Protein accession | YP_003196980 |
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| Protein GI | 258404238 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.873822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG TATATTTAGA CAACAACGCC ACCACCAGAG TGGCCCCTGA AGTCGAGGAG
GCCATGCGGC CCTACCTAGG GGAGTTGTAC GGCAATCCCT CGAGCATGCA CCGCTTTGGC
GGACAGGTGG GCAAGGATTT GCGTATCGCC CGCGAACAGG TCGCAACAGG CCTCGGCGCC
GATCCGGAAG AAATCATTTT CACCTCCTGC GGCACGGAAG GGGACAACAC GGCCATCCAT
GCCGCCTTGG AAAGTCAGCC CGACAAGCGC CACATCGTGA CCACCAAAGT CGAACATCCG
GCCGTGCTCA ATTATTGCAA GCACCTGGAA AAAAAGGGGT ACGAGGTCAC GTATCTCGGC
GTCGACACCC ACGGCCGCCT CGACCTCAAT GCGTTGAAAA ACAGTCTGCG CCCGGATACG
GCCATTGTCT CCATCATGTA CGCCAACAAT GAAACCGGGG TCATTTTTCC GCTGGACGAG
ATCGCCCCGC TGGTCAAGGA ACGGGGCATT CTCCTGCATA CCGATGCCGT GCAGACCCTG
GGCAAGATCC CTTTTTCAGT CGCCGATCTG CCGGTGGATT ATCTCGTTGT CTCCGGCCAC
AAAGTGCACG GGCCCAAGGG CGTCGGCGTC TTGTACGTGC GCCGCTCCGC CCCCTATGCT
CCTTTTGTCA TTGGCGGGCA CCAGGAGCAC GGTCGGCGGG CCGGAACGGA AAACACGGCC
TCGATCATCG CCATGGGCAA GGCGGTCGAG TTGGCCACCA CGGATATCGC CGCGGAACAA
AGCCGGATCA GCGCCCTGCG CGACCGGCTC CAGAGCGGTT TGCTGGAGGC GATCCCGGAC
ACCGTGGTCA ACGGCGAGGC CGCAGAGCGC CTGCCGAACA CCCTGTCCAT CGCCTTCAAA
TATATTGAAG GCGAGGCCAT GCTCCTGCTG CTCGACGAGT TCGCCATCTG CGCGAGTTCC
GGATCGGCCT GCACCTCAGG CAGCCTGGAG CCCTCCCATG TCCTGCGGGC CATGGGGGTT
CCGTTCACAT ATGCCCACGG CTCACTGCGC TTTTCCCTTT CGCGGTACAC CACCGAGGAG
GAGATCGACA CCGTCCTGCG CGAACTTCCG CCGATCATCG AACGCTTGCG GGCCATGTCC
CCCTTTCGGC GCGGAGAAGA GGCTTTCGGA GTCTCCTGTG GTATCGAGCG GGACACGGTG
TAG
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| Protein sequence | MNPVYLDNNA TTRVAPEVEE AMRPYLGELY GNPSSMHRFG GQVGKDLRIA REQVATGLGA
DPEEIIFTSC GTEGDNTAIH AALESQPDKR HIVTTKVEHP AVLNYCKHLE KKGYEVTYLG
VDTHGRLDLN ALKNSLRPDT AIVSIMYANN ETGVIFPLDE IAPLVKERGI LLHTDAVQTL
GKIPFSVADL PVDYLVVSGH KVHGPKGVGV LYVRRSAPYA PFVIGGHQEH GRRAGTENTA
SIIAMGKAVE LATTDIAAEQ SRISALRDRL QSGLLEAIPD TVVNGEAAER LPNTLSIAFK
YIEGEAMLLL LDEFAICASS GSACTSGSLE PSHVLRAMGV PFTYAHGSLR FSLSRYTTEE
EIDTVLRELP PIIERLRAMS PFRRGEEAFG VSCGIERDTV
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