Gene Dret_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0096 
Symbol 
ID8417900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp128053 
End bp129630 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content56% 
IMG OID645036661 
Producthistidine kinase 
Protein accessionYP_003196976 
Protein GI258404234 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCCT TTGTGGCTGA CCGTTTCAAT CAACTCAAAT TCAAGAATAA ATTCCTGGTC 
ATTACCCTGG CGAATATCAT TGTCGTCCTG GCCGCGTTTT CGTTTGTGGT CGACGATTAC
TTCAAGAAAC GGATCAGCCA GAACCAGGAG GAGAACAACC TCAGTCTGGC CCGGAATATG
GCCCGGGAGT CGGTGGATCC GCTGCTTATC CACGATTATC TCCAACTCGA CGTCCTGGTG
CAGAGCACCA AGGAAGCTTT GCTGTGCAAG TACGCGTATA TCCTTGATCA CCACGGCCGT
GTCGTGGCCC ATTCCGACAA GTCCAGGCTG GGCCAGAAAT ATTCCCCCCC CTCCACTGAG
GAACAATATA TCCGGGACCG CAAGGTTGCT GGGGTCATGT ACCAGGATTA TTTCCTGCCG
ATCCGGGTCC GGGGCGAGCT TTTGGGGTAT GCCGTGGTCG GCATCGATCG CAACAAGGAG
ACGGCCGTTA TCCAGCAGAG TCTGCATGGA CTGCGTCTGC GGCTTTTGAT TGTAGCCGTG
AGCCTGTTCG CTTTTACCGC CCTGACCGCC TCCTATCTCG CCTCGCGACT GACCCGGCGG
ATCGGGGATC TCAAACAGAG CATGCGCCAG GTGCAGCAGG GCGACCTCAA CGTGCAGTTG
CCCCTGCCCA GGGCCTCCTC ATGCAAAGAC CTCTGGGACT GCCCTCTCAA GGAGTGTCCC
GGGTACGGCT CGGATGCCTG CTGGGCCCAG GGGCAGTCCT TTTTGCAACC CCAGAAAAAC
TGCCTTGAAT GCCTGGTCTA TAAGCGAGCC TGCGGCGATG AGATCGGAGA ATTGCACATC
GCTTTCAACC AGATGGTCCG GGATCTCAAG CGCAATCTGG ACAAGCTGCA CCAGGCGGAC
ATGGAGAAGA ACCGTCTGGA GCGGTTGTCC CTGTTGGGGC AGATGGCGGC CCAGGTCGCC
CATGAAATCA AGAATCCCTT GAATTCGATC AAGGGATCGG CGCACTATCT CAAGGCCAAT
TTTGAAGGGC GGATCCTGCA CGAATTCCTG CATGTCATTG AGGAAGAAAG CGAGCGGCTC
AGTGATATCT TAACGGATTT TTTGAATTTT TCGAAACCAG GAGTGCCGCA TTTCGAACGG
GAGGATCTCA ATGCTCTGGT CCGCGATACT CTGCGACTGG CCAGCCGCGA CACCCAGGAC
GGCGTCGTCC GGCTCGATTC CACTCTGGAC CCGCAATTGC CCCCATTTTG GTTTGACTAC
GCCAAGCTGC GGCAGAGCCT TTTGAATCTG GTCCTCAACG CGGTCCACGC CGTGCGCGAA
GGCGGCACGG TCCAGGTGAG CACGATCGCG CAACCAGACC GGGGCCAACT GGTTATTCAG
GACGATGGGC AGGGTATCAC CGCCCAGGAA TTGGAAAATA TTTTCAAGCC GTTTTATACC
ACAAAAAACA GAGGCAACGG TTTGGGGTTG TCCATAGTCG AACAATATAT CCGGGCCCAT
AAAGGGACCA TCGACGTCGA CAGCCAGCCC GGTCAGGGCA CGACCTTCAT TATAACCCTC
CCCTTTGATC CACGATGA
 
Protein sequence
MMSFVADRFN QLKFKNKFLV ITLANIIVVL AAFSFVVDDY FKKRISQNQE ENNLSLARNM 
ARESVDPLLI HDYLQLDVLV QSTKEALLCK YAYILDHHGR VVAHSDKSRL GQKYSPPSTE
EQYIRDRKVA GVMYQDYFLP IRVRGELLGY AVVGIDRNKE TAVIQQSLHG LRLRLLIVAV
SLFAFTALTA SYLASRLTRR IGDLKQSMRQ VQQGDLNVQL PLPRASSCKD LWDCPLKECP
GYGSDACWAQ GQSFLQPQKN CLECLVYKRA CGDEIGELHI AFNQMVRDLK RNLDKLHQAD
MEKNRLERLS LLGQMAAQVA HEIKNPLNSI KGSAHYLKAN FEGRILHEFL HVIEEESERL
SDILTDFLNF SKPGVPHFER EDLNALVRDT LRLASRDTQD GVVRLDSTLD PQLPPFWFDY
AKLRQSLLNL VLNAVHAVRE GGTVQVSTIA QPDRGQLVIQ DDGQGITAQE LENIFKPFYT
TKNRGNGLGL SIVEQYIRAH KGTIDVDSQP GQGTTFIITL PFDPR