| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0090 |
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| Symbol | |
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| ID | 8417894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 121194 |
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| End bp | 121964 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036655 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_003196970 |
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| Protein GI | 258404228 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGCC ATGAAAAACA AGTCTTCGCT GTCACCGATG CCGTCATCGA TGTGCCGACC
CACTATTGTC CCGGCTGCCA GCACGGCACC ATCCACCGCC TTGTCGGCGA ATGTTTGGAC
GAAGCCGGGT TGACGGAACA GGCCATCTGC ATCGGCTCCA TCGGGTGTTC TGTATTTATC
TACAATTATC TCAATGTGGA CGCTGTGGAG GCCCCGCACG GCCGCGCCCC GGCCGTGGCC
ACCGGCGCCA AGCGGGCCAA TCCCGAAAAT TTCGTCTTCG CCTACCAGGG CGACGGCGAC
CTCGCCTCCA TTGGCCTCGC GGAAATCATG CACTGCGCCA ACCGCGGCGA GCGGGTCTCG
GTGGTCTTCG TCAACAACAC GGTGTACGGC ATGACCGGGG GCCAGATGGC TCCGACGACG
ATGGTCGGCC AAAAGACGAC CACCTGTCCT GGTGGCCGCT GCGCCGAACG CGAGGGCCTG
CCCATGAAGA TGGCCGAAAT CATTGGCGGT CTCGGTGGCA CGGCCTATTC GGCCCGTGTC
GCGGTGGATA CGGTCAAGCA CCTCAAGCAG GCCAAAAAAG CGCTCAAAAA GGCCTTTGAG
GTCCAGACCC AGGGCAAAGG TTTCGGGTTC GTGGAACTCT TGGCAACATG TCCCACCAAC
TGGCGCATGT CCCCGCTTGA GGCCAACGCC CGCATCAGCG AGGAAATGAT CCCCTATTTT
CCGCTGGGCA CATACAAAGA CATCGAGGAC GAGGGGGGAC AGCAGTCATG A
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| Protein sequence | MSSHEKQVFA VTDAVIDVPT HYCPGCQHGT IHRLVGECLD EAGLTEQAIC IGSIGCSVFI
YNYLNVDAVE APHGRAPAVA TGAKRANPEN FVFAYQGDGD LASIGLAEIM HCANRGERVS
VVFVNNTVYG MTGGQMAPTT MVGQKTTTCP GGRCAEREGL PMKMAEIIGG LGGTAYSARV
AVDTVKHLKQ AKKALKKAFE VQTQGKGFGF VELLATCPTN WRMSPLEANA RISEEMIPYF
PLGTYKDIED EGGQQS
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