Gene Dret_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0084 
Symbolera 
ID8417888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp114610 
End bp115548 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content58% 
IMG OID645036649 
ProductGTP-binding protein Era 
Protein accessionYP_003196964 
Protein GI258404222 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA GCTCCTTTGG GGAGGATTAC GGCGGGACGT ATCGTAGCGG CCTGGTGGCC 
ATTATTGGTC CGCCGAACGC TGGAAAATCA ACACTTTTGA ATCAATTTCT GGGCCAGAAG
GTGGCTATTG TCAGCCCCAA ACCCCAGACC ACCCGCAATC AGATCAGCGG CATCCTGAGT
ACGGATGAGG CCCAGGTGGT CTTTCTGGAC ACCCCGGGTG TGCACAAGTC CGGCCAGCGG
TTTAACCGCT ACATGGTCGA TGCGGCCTGG CGGGCGCTGA CCGCTTCCGA AGCGGTCTTG
CTGGTCTTGG ACGCCGGGCT TTATCTCGCG CGGCCGCAGC TGCTGGAGCG GGACACGAGC
CTGATGCGCA AACGGGTCCA ACAAAGCGGC AATCCGGTTT TCCTGGCCCT GAACAAGACC
GATACGATCA AGGATAAATC CCGTTTGCTG CCGCTGTTGC AGCGCTTGAG CGAGCTGTGG
CCCGAGGCCG AACTCCATCC TATCAGCGCC CTGCGCGGTA ATGAGACGGA TGCTCTGCTG
TCCGGGTTGT TGGGGGCTTT GCCCGAAGGG CCGCCGCTGT ATCCTGAAGA CCAGATCTCG
ACGTTGCCGA TGCGGTTCAT GACCGCAGAG ATTATCCGGG AGAAGCTCTT TTTGGCCCTG
GAAAAGGAAT TGCCCTATAA TCTGGCGGTC ATTGTCGAAC AATGGGAGGA ACGGCCCACG
GGGATTTCGG TCTACGCGAC CATCTATGTC GCCCGCCCAA GCCAGAAAGC CATAGTAATC
GGCAAAGGCG GACGGTTGCT CAAGGAGATC GGTCAGCAGT CCCGGCTGGA ACTTGCCGAG
ATGATCGAAA AACCGGTGCA TCTCGACCTC TGGGTCAAGG TCAAGAAGCG GTGGCACGAA
GACATGTCCT TTTTGGGCGA GCTCGGGCTT ACGGAATAA
 
Protein sequence
MDESSFGEDY GGTYRSGLVA IIGPPNAGKS TLLNQFLGQK VAIVSPKPQT TRNQISGILS 
TDEAQVVFLD TPGVHKSGQR FNRYMVDAAW RALTASEAVL LVLDAGLYLA RPQLLERDTS
LMRKRVQQSG NPVFLALNKT DTIKDKSRLL PLLQRLSELW PEAELHPISA LRGNETDALL
SGLLGALPEG PPLYPEDQIS TLPMRFMTAE IIREKLFLAL EKELPYNLAV IVEQWEERPT
GISVYATIYV ARPSQKAIVI GKGGRLLKEI GQQSRLELAE MIEKPVHLDL WVKVKKRWHE
DMSFLGELGL TE