Gene Dret_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0080 
Symbol 
ID8417884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp106922 
End bp107356 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID645036645 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003196960 
Protein GI258404218 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC TCCGTGCCCT GCGCATGGAA CGGTGTATCG GATGTTATTC CTGCTCGTTG 
GCCTGTGCCC GCCTGGTCCA CGGCAGCCTG TCCTGGAAGC GTTCCGGCAT CAGGATCCAC
TCCGCCGGGG GCTTGAGCAC CGGATTTGAA GCGCAGGTCT GCCTGGCCTG TGATCCCGCC
CCGTGTGCCG AGGCCTGTCC CACCGGGGCC ATGCGCCAGC GCAAGGGCGG CGGGGTGGTC
TACACAAAAT CGCTGTGCAT CCAGTGCGGC GATTGTGCCC GGGCCTGCCC GGTGGACGCC
ATCTATATGG ACCCGGAGAC CAATGCCCCG GTGGTCTGCA TCCATTGCGG CCGGTGTGTT
GAGTTCTGCC CCCATGATTG CTTGGAGATG GTCACGGTGC CGAGTGCGTC CAAGGAGGAT
CCCCATGCGT ACTAG
 
Protein sequence
MKILRALRME RCIGCYSCSL ACARLVHGSL SWKRSGIRIH SAGGLSTGFE AQVCLACDPA 
PCAEACPTGA MRQRKGGGVV YTKSLCIQCG DCARACPVDA IYMDPETNAP VVCIHCGRCV
EFCPHDCLEM VTVPSASKED PHAY