| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0073 |
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| Symbol | |
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| ID | 8417877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 94117 |
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| End bp | 95109 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645036638 |
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| Product | Extracellular solute-binding protein |
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| Protein accession | YP_003196953 |
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| Protein GI | 258404211 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.303636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG CGCTTTGGAC GGTATTTATC GTCGGACTTG CCCTGAGCCT CTGTACTGCG
GCTCAGGCCC GGACCTGGAA AGTGTCCCAC GTTCGCCCCC AGGACACTGC CATTGACAAA
GATCTCAACG CTTTCGTGCA GGACGTTGAC GAGGCCACCA ACGGAAAAAT CAACATCAAA
GTTTACGCTG CCAGTTCCTT GGGTGACTAC ACCGTCGTGC AGGAACGGGT CGGCCTCGGC
GCTGTGGAAA TGGCCTGCCA GCCCCCGGCG ACCGGTGCGG ACAAGCGGTT TCAGATCCAA
TACTTCCCAT ACTTGGTGAA AAACTACGAC CAAGCCAAGA AGAATTTTGG CCCTGACGGC
CCCTTGCGCA AAGAAATCGG CAAGCTCTAC GGTGAGCAGG GCATCGAACT TCTGGCTGCC
TGGCCGGTGT ACTTCGGCGG CATCGCCCTG AAAGAAGAAC CCAAGAACCC CGGTGACCCC
ACGGCCAAAA AAGGTCTCAA GGTCCGCGTT CCGCCCATGA AGACCTTCCA GATGCTGGCC
AATAACATTG GCTACATGGC GACACCGCTG CCGTTCTCGG AAGCCTTCAC CGCCGTGCAA
ACCGGTGTTG TCGACGGCGT GATCGGTTCC GGTGCTGAAG GGTACTATGC TTCCTTCCGC
GACGTGACCA ACTACTATGT CCCGATGAAC ACCCACTTTG AAGTCTGGTA CCTCATCGCC
AATGAACGCA TGGTGGAAGG GCTGGACAAG GACGAAATGG CTGGCTTGAA AGCCGCTGCC
CAGCGCTTTG AAGAAAACCG CTGGGACCAA GTGGTCGAAG ACCAGAAGAA AAATGAACAG
CGCCTGGCTG ATTACGGTGC TGAAATCATC GAAATTACTC CTGAAGACCT GACGAAGACC
GCCGAAATCG TGCGCGAAAA CGTCTGGCCT GAAATCCTGA GCGACGTTGG CACCGAATGG
GGCCAATCCG TTCTGGATAA CATCAAGGAG TAG
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| Protein sequence | MKKALWTVFI VGLALSLCTA AQARTWKVSH VRPQDTAIDK DLNAFVQDVD EATNGKINIK
VYAASSLGDY TVVQERVGLG AVEMACQPPA TGADKRFQIQ YFPYLVKNYD QAKKNFGPDG
PLRKEIGKLY GEQGIELLAA WPVYFGGIAL KEEPKNPGDP TAKKGLKVRV PPMKTFQMLA
NNIGYMATPL PFSEAFTAVQ TGVVDGVIGS GAEGYYASFR DVTNYYVPMN THFEVWYLIA
NERMVEGLDK DEMAGLKAAA QRFEENRWDQ VVEDQKKNEQ RLADYGAEII EITPEDLTKT
AEIVRENVWP EILSDVGTEW GQSVLDNIKE
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