Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0065 |
Symbol | |
ID | 8417869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 84795 |
End bp | 85904 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645036630 |
Product | pyridine nucleotide-disulfide oxidoreductase family protein |
Protein accession | YP_003196945 |
Protein GI | 258404203 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | [TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCGGT TGGTCCTTTT AGGTGGCGGG CACGCTCATA TGACAGTCAT GGCCAGCCTG AACGAGTTTC TGGACCGTGG ACACGAAGTA CGTGTCGTTG GGCCGGAGCC GTATCACTAT TATTCCGGTA TGGGGCCGGG GATGCTCGGC GGCCATTATA CGCCAGAGGA GATCCGTTTC GATATCCGGC GCATGGTTGA GAGCAAGGGA GCGAGCTTTG TCGAGGACAA GGCCGAGCGG ATCGATGCGG CCTCCCGCGT GGTCCATCTG GCTTCAGGGC AACACCTGGA ATACGATGTT CTGTCCTGTA ATACCGGCAG CGTCGTTGAT CAGCGCTTGG CGGCCCCGGA CGCGACGAAT GTGTATACTG TCAAACCGAT CGCCAATCTC CTAGCGGCGC AAAAGCGGAT CAAAGATTTG GCCTCTTCCA AGAGTGAACT CCGCATCGGT GTTGTCGGTG GTGGCCCGGC AGCGTTGGAG GTCGCCGGCA ATGCCCTGAG TTGGGCGCAC CGGGTCAACG CCTCCTCGCC GAAGGTGACC GTATTCGGAG GCAAGGAATT TTTGCGCCGC CATCCGGGCA AGGTTCGCCA GTTTGCCATC ATGTCCCTGG AACAACGCGG AATCGAGTTG GTTCAGGGCA GTTATGTGGA CAAAGTGACC GGCTCGCGTA TTGTTCTGGA GGACGGTTCC AGCGCTGATG TCGATCTCGT TTTTTTGGCT CAGGGTGTGC GGCCTTCTCC CTTGTTCCGG GCCTCGGACG TAGCCGTGGG GCCAAACGGA GGGCTGGCCG TCAACGAATA TCTCCAATCC ACCGAAGAGC CATCCATTTT CGGGGGCGGC GACTGCATCC ATTTCGAGCC GGAGCCGCTG GACAAGGTCG GTGTCTATGC TGTGCGGGAA AATCCGATTT TGAAGGCCAA TCTCATGGCC CAACTTGAGG GCAAGGAACT AACCCCCTTT GATCCTGGGG ACGGGTATCT GCTCATTTTC AACCTTGGCG ACGGCACCGG CATCTTCTGG CGCAAGAAGA CCATCTTTCA CGGTCGCCCG GCTTTCTGGC TCAAAGATTT CATCGACAGG CGGTTCATGA AGCGGTTCCA AAAGGCGTGA
|
Protein sequence | MARLVLLGGG HAHMTVMASL NEFLDRGHEV RVVGPEPYHY YSGMGPGMLG GHYTPEEIRF DIRRMVESKG ASFVEDKAER IDAASRVVHL ASGQHLEYDV LSCNTGSVVD QRLAAPDATN VYTVKPIANL LAAQKRIKDL ASSKSELRIG VVGGGPAALE VAGNALSWAH RVNASSPKVT VFGGKEFLRR HPGKVRQFAI MSLEQRGIEL VQGSYVDKVT GSRIVLEDGS SADVDLVFLA QGVRPSPLFR ASDVAVGPNG GLAVNEYLQS TEEPSIFGGG DCIHFEPEPL DKVGVYAVRE NPILKANLMA QLEGKELTPF DPGDGYLLIF NLGDGTGIFW RKKTIFHGRP AFWLKDFIDR RFMKRFQKA
|
| |