| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0053 |
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| Symbol | |
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| ID | 8417856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 67565 |
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| End bp | 68833 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036617 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003196933 |
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| Protein GI | 258404191 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG AGTACGCTAC AGACGACCGC ATCCGGGAAT TGGAAGCTGA GTTGGCCGCG
GCCAAGAAAC GCCTTGCCGC ATTGGAAAAG CGGCAGGAAT CCGACGCCCC GCCGGCCATG
CTCCAGGACG TCCTGGACGG CATCGATATG GATATCCATA TCACCGATAG TCACGAGGGC
ACCATTCTCA TGGCCAATGC CCGGATGTAC ACGACCTATT CGGGGACCAT CGTCGGCCGC
CATTGCTGGG ATGTCATTCG CAACGCGAAT TCGCCTTGCC CGGGGTGCAT GGTCGAGCAG
TTGGATGACC CAAAGGTCCC GTCAGTGCGC TGGGAAGATT ACAATCTCGC CGCCGGCGGC
TGGTTCGAGC ACATCGCCCG CCGCATCACT TGGCAGGACG GCCGTCCGGC GGTCCTGCAC
ATTTCCCGGA ACACAACTGA GGCCCACGAA ACAGCTCGGG CCTATCGACG CAGTGAGCGC
AAATACCGGC GGATGAACCG GCTCTTGCGG CTCATGGCCG ACAACGTCCC GGACCTGATC
TGGGCCAAGG ATCTGGACGA CCAATATTTG TTCGCCAACA AGGCCATTTG TAAGCAATTG
CTGCGTTGCT CAGACCCTGA ATTGCCCCTT GGCAAAACGG ATCTGTATTT CGCTGAGCGC
GAGCGTCGCT GGGGTCACGA CCACACCTTT GGTGAGATCT GTATCGACTC GGACCAAGTG
GTCAAGGCCA ACCGCAAAAG CGGCCGCTTC CTGGAAGACG GGAAGGTCCG CGGCCGATAC
TTGGTGCTCG ATGTTCATAA GGCGCCGTTT TTCGACGAAG ATGGAGCCAT GATCGGCACC
GTGGGCGCGG CACGGGAGGT GACCGAGGAG ATCCAGCGCC AGCAGGAACT CGACGACATT
CAGAGCAAGT ACCGTCTCAT CCTCGAAAAC TGCAACGACG GCATTGGCGT CAACGGTCCC
GACGGCTTCT TTCGCTGGGT TAACCCCAGC CTGTGCCGTA TTTGTGGGTT CTCTGAACAG
GAACTGCTCA AGCACAGGAC AACCACTTTC GTCGACCCGC GGGACCAAAA CTGGGTCTGG
GACTATTTCC GGCAACGACT CGATCCCGAG CAACCCGATC CGGAGCAGGT CTATCCCTTT
CGTATCGTGC GCAAAGATGG GGTCGTCCGT TGGCTCCAGG CCTCGGTGGT CAAGATTGAG
TGGAACGATC GGCCTGCCGC GTTGGTTTTT TATACCGACA TCACAGGTCG GTATCCTCAT
CTGGACTGA
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| Protein sequence | MSEEYATDDR IRELEAELAA AKKRLAALEK RQESDAPPAM LQDVLDGIDM DIHITDSHEG
TILMANARMY TTYSGTIVGR HCWDVIRNAN SPCPGCMVEQ LDDPKVPSVR WEDYNLAAGG
WFEHIARRIT WQDGRPAVLH ISRNTTEAHE TARAYRRSER KYRRMNRLLR LMADNVPDLI
WAKDLDDQYL FANKAICKQL LRCSDPELPL GKTDLYFAER ERRWGHDHTF GEICIDSDQV
VKANRKSGRF LEDGKVRGRY LVLDVHKAPF FDEDGAMIGT VGAAREVTEE IQRQQELDDI
QSKYRLILEN CNDGIGVNGP DGFFRWVNPS LCRICGFSEQ ELLKHRTTTF VDPRDQNWVW
DYFRQRLDPE QPDPEQVYPF RIVRKDGVVR WLQASVVKIE WNDRPAALVF YTDITGRYPH
LD
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