Gene Dret_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0046 
Symbol 
ID8417849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp60097 
End bp60450 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content53% 
IMG OID645036610 
Productribosomal protein L20 
Protein accessionYP_003196926 
Protein GI258404184 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTCA AACGCGGTGT GACCGCCAGA CGGCGTCACA AGAAATATCT CAAGATGGCC 
AAAGGTTTTC GTGGTTCGCG GAGCCGTTTG TATCGTACCG CCCGCGAAGC TGTGGAAAAA
TCGCTGTGCT ATGCCTATCG TGATCGCCGC CAGAAAAAGC GTGATTTTCG TAAGCTTTGG
ATCCAGCGGA TCAATGCCGC CGCCCGGGAA AACGGCATGT CGTACAGTCG TTTCATGAGC
GGTCTGAAGA AGTCTGGTGT GGAACTGAAC CGGAAGGTCC TGGCTGACCT CGCGGTCAAA
GACAAGCACG GGTTTTCTAA AGTCGCAGAA TTGGCCAAAG AAAAGGTACA CTAA
 
Protein sequence
MRVKRGVTAR RRHKKYLKMA KGFRGSRSRL YRTAREAVEK SLCYAYRDRR QKKRDFRKLW 
IQRINAAARE NGMSYSRFMS GLKKSGVELN RKVLADLAVK DKHGFSKVAE LAKEKVH