| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0043 |
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| Symbol | |
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| ID | 8417846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 57308 |
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| End bp | 59257 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036607 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_003196923 |
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| Protein GI | 258404181 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGTAC GAATTGCCGA CAACGAGGTC GAAGTCCCGT CCGGACAGAG CTGCGCTGAA
GCCCTGGCCC AGGCCGTGAG CAAGAAAAAG ATGAAGCAGG TGGTGGCCGG AAAGTGCGGC
GAAACGGTGC TGGACCTGCG CGATCCGGTG CCGGAAGGGT GCAGTGAGTT GGAGCCGGTC
TTTGCCGAGA GCCCGGAAGG ATTGGCCGTC ATTCGCCACA GCACGGCCCA CGTCATGGCC
GAAGCGGTCA AGTCGTTGTT TCCCACGGCC AAGGTGACCA TCGGCCCGGA TATCGAGGAC
GGTTTCTACT ACGATTTCGA TTTTGAACGT TCTTTTACCC CGGAAGATCT CGAGGCCATT
GAAAAGGAAA TGGAGAAATC CGTTGGTGCG GATATGCCTT TCGAGCGCCG GGAGGTCTCC
GTGGACGAGG CCAAGAAGTT TTTCCTGCAC CAAAACGAGT CCTACAAGAT CGAGCTCCTG
GAGGAGATGG ACGCTGACCG GGTCACGCTT TACACCCACA ACGGGTTCAC CGACTTGTGC
CGCGGTCCCC ATGTTCCTTC CACCGGCTAT CTCTCGGCCT TCAAGCTGAT GAAAGTGGCC
GGAGCCTATT GGCGCGGTGA TGAGAACCGG ACTATGCTCC AGCGTATTTA TGGCACGGCC
TGGGCGCGTC CAAAGGACCT CAAGAATTAT CTCCAGCAGC TCGAAGAGGC CAAGAAGCGC
GACCACCGCA AACTCGGGGC ACAACTCGAT CTGTTCAGCT TCTCCGAGGA GGCTGGACCC
GGCATGCCGC TGTGGCACCC CAAGGGCGCC TTGATCCGGA CCATCCTTGA AGACTTTTCG
CGCAAGGAGC ACCTGCGCCG CGGCTATCAG CTCGTTCAGG GACCGACCCT TTTGCGGCAG
GAGTTGTGGC AGCGTTCCGG GCACTACGAC AATTACCGTG AGAACATGTA CTTCACGGAG
ATTGACGACC AGGCCTACGG CATCAAGCCC ATGAACTGCC TGGCCCATAT GCTCATCTAC
AACACCAAGA TCCGGAGCTA CCGGGACCTG CCGATCCGGT ATTTCGAACT CGGCACAGTC
CACCGGCATG AGAAATCTGG GGTCCTGCAC GGCTTGCTCC GTGTGCGCCA GTTCACCCAG
GACGACGCCC ATATCCTCTG CCGCCCGGAC CAACTCCAGG ACGAGATCTC CAAGATCGTT
CGTTTCGTTC AGGATGTGCT GGGTCTGTTC GGCTTCGACT ATGAGGTCGA AATCTCCACG
CGGCCGGAAA AGTCCATCGG CTCGGACGAC GCCTGGGACC GGGCCACGGA CGCCCTGACC
AAGGCCCTGG ACGAGCTTGG CGTCGAGTAC GGGATCTGTG CTGGCGACGG GGCCTTTTAC
GGGCCGAAAA TCGATATGAA GCTCAAGGAC GCCCTGGGGC GGAAGTGGCA ATGCACGACC
ATTCAATGTG ATTTTACCTT GCCAGAGCGC TTTGATTTGG TATACGTGGG GCAAGACGGA
CAGCGCCACA GGCCGGTCAT GCTTCACCGG GCCATGCTCG GGGCCATCGA GCGGTTTTTG
GGCGTACTCC TGGAGCACTA CGCCGGGGCG TTGCCGACGT GGCTGATGCC GGAACAGGCT
CGCGTCCTCA ATATTACTGA TGATCACGCT GAATACGCCC AGCAGTGCGT GGACCAGCTC
CGTGCCGCCG GTATTCGCGC CGAAGCCGAC TTGCGCAACG AGAAGCTGGG GTACAAGGTG
CGCGAGGCCC AAATGGAAAA GATCCCCTAC GTGCTGGTGG TCGGTGAACA GGAAGTGGCT
ACTTCCGGCG CCAACCTCCG TTTGCGCGGC GGGAAAAATA TCGGGGTCTT GCCGGTCGAC
GACATCATTG ATCGTATCCG GCATGATTGT CTGGAACCAT TCAAACGCGG AGGAATGCGC
TATAGCTTCG CCTACGAAAG CACGCCGTAA
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| Protein sequence | MQVRIADNEV EVPSGQSCAE ALAQAVSKKK MKQVVAGKCG ETVLDLRDPV PEGCSELEPV
FAESPEGLAV IRHSTAHVMA EAVKSLFPTA KVTIGPDIED GFYYDFDFER SFTPEDLEAI
EKEMEKSVGA DMPFERREVS VDEAKKFFLH QNESYKIELL EEMDADRVTL YTHNGFTDLC
RGPHVPSTGY LSAFKLMKVA GAYWRGDENR TMLQRIYGTA WARPKDLKNY LQQLEEAKKR
DHRKLGAQLD LFSFSEEAGP GMPLWHPKGA LIRTILEDFS RKEHLRRGYQ LVQGPTLLRQ
ELWQRSGHYD NYRENMYFTE IDDQAYGIKP MNCLAHMLIY NTKIRSYRDL PIRYFELGTV
HRHEKSGVLH GLLRVRQFTQ DDAHILCRPD QLQDEISKIV RFVQDVLGLF GFDYEVEIST
RPEKSIGSDD AWDRATDALT KALDELGVEY GICAGDGAFY GPKIDMKLKD ALGRKWQCTT
IQCDFTLPER FDLVYVGQDG QRHRPVMLHR AMLGAIERFL GVLLEHYAGA LPTWLMPEQA
RVLNITDDHA EYAQQCVDQL RAAGIRAEAD LRNEKLGYKV REAQMEKIPY VLVVGEQEVA
TSGANLRLRG GKNIGVLPVD DIIDRIRHDC LEPFKRGGMR YSFAYESTP
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