| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0041 |
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| Symbol | |
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| ID | 8417843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 52682 |
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| End bp | 54190 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645036604 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_003196921 |
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| Protein GI | 258404179 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCG ATCGCGCCAG CGGTATCCTG CTCCATATCA CCTCCCTGCC CGGCACCTAT
GGCGTGGGCG ATGTCGGACC GCAGGCCAGG CGGTTTGTGG ATTTTCTCGC CGCCGCCGGC
CAGCGCTATT GGCAGGTTCT CCCCGTGCAC CCGACCCAGG ACGGGGCCGG TCACTCCCCG
TACAGCAGCA CCTCCGCCCA TGCCGGCAAC GAACTGCTCA TCAGCCCCGA GGATCTGGTC
GCGGAGGGGC TGCTCGGGGA AAGCCACATC CGGCCTTGGC GGCGCCAGGC CGGGGAATCT
CAGGCGCATT ATGACTGGGC TCAGGCCGCC AAACGCGAAT GCTGTGCTGT GGTCCAGGAT
CGCCTCCATC GTCGCCTGCT TCCCGCCTTT GAGGCCGAAT TCCAGGACTT CTGCCGCACC
CAGCGCGGCT GGCTGGACGA CTTTGCGTTG TTCAGCGCTG CGAAAAACCA TTTTGGTCCC
CGGCGGTCCT GGCGGTATTG GCCTGAGGAG ATCCGCCTCA GGCAGCCACG AGCGTTGCAG
TGGATGCGCC AGGAACTCGC CTTGGCCATT GAACGTGAAA AGCTCGGTCA ATGTCTGTTT
TTCCGCCAAT GGCGCCGCCT GCAGGCCCGT TGCCGCGCCA AGGAGGTGGC CTTGATGGGC
GATGTTCCCA TCTATGTCGA CTATGAAAGC GCTGATGTCT GGAGTCATCC GGAATATTTC
AAGCTCGATG CAACGCTCCG TCCGCCTGTG GTCGCCGGCG TGCCGCCCGA CTATTTCAGC
GCTACCGGCC AGCGGTGGGG CAATCCGGTC TATGATTGGC GGAAGTTGTG TCAGGACGGC
TTCCATTGGT GGGTGGATCG CCTGGAGGGC GAACTGCAGC TGTGCGACGT CCTGCGCTTG
GACCATTTCC GGGGCTTTTC CGCCTGCTGG GAGGTGCCGG TCGAACATGA GACCGCTGAG
AACGGCTCTT GGGTCCACGT CCCGGGCGAG GCGTTGTTCG CCTTGTTGCA GGAGCATTGG
GGCCGACTGC CACTTGTGGC CGAGGATCTG GGATATATTA CCGACGAGGT CCGGCATCTC
AAGCAACGCT TCGATTTGCC CGGCATGGCG CTGCTGGTCT TTGCCTTTGA TGGGGATCCC
CAGAACGCTT TTTTGCCGGA GCATCACGAC CCCAATCTGG TCGTTTATAC CGGCACGCAC
GATACGAACA CCGTTCGGGG ATGGTACGAA GAAGAAATCA CTGCGGAGCA GCGGTCTCAG
CTCCGCCGTC ATCTCGGTCA TGCCCCCGCT GCTTCGCACG TGGCCCAGGA TCTCGTCCGC
CTGGCCCTGG AGAGCCGGGC GCGGACGGCG ATCCTCCCGC TACAGGATGT GCTGGGGCTC
GGCAGCGAGG CCCGGATGAA CGTACCCGCG GCCCCCGAGG GCAATTGGAT CTGGCGGACT
TCCTCAGAAG CACTGCACGA AGACGTGGCT GCCTGGCTGG CTGAAGTGAC GGCTGCCAGC
GGCCGGTAG
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| Protein sequence | MLTDRASGIL LHITSLPGTY GVGDVGPQAR RFVDFLAAAG QRYWQVLPVH PTQDGAGHSP
YSSTSAHAGN ELLISPEDLV AEGLLGESHI RPWRRQAGES QAHYDWAQAA KRECCAVVQD
RLHRRLLPAF EAEFQDFCRT QRGWLDDFAL FSAAKNHFGP RRSWRYWPEE IRLRQPRALQ
WMRQELALAI EREKLGQCLF FRQWRRLQAR CRAKEVALMG DVPIYVDYES ADVWSHPEYF
KLDATLRPPV VAGVPPDYFS ATGQRWGNPV YDWRKLCQDG FHWWVDRLEG ELQLCDVLRL
DHFRGFSACW EVPVEHETAE NGSWVHVPGE ALFALLQEHW GRLPLVAEDL GYITDEVRHL
KQRFDLPGMA LLVFAFDGDP QNAFLPEHHD PNLVVYTGTH DTNTVRGWYE EEITAEQRSQ
LRRHLGHAPA ASHVAQDLVR LALESRARTA ILPLQDVLGL GSEARMNVPA APEGNWIWRT
SSEALHEDVA AWLAEVTAAS GR
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