| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0039 |
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| Symbol | |
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| ID | 8417841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 49440 |
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| End bp | 52169 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036602 |
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| Product | malto-oligosyltrehalose synthase |
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| Protein accession | YP_003196919 |
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| Protein GI | 258404177 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCA GTACCTATCG CGTCCAACTC CATCCGGAAC GGGGGTTTGC CTCCCTGGAC
AAGGATCTTG AGTACCTGCG TGATCTCGGG ATCCATGCCG TTTACGCCTC GCCGGTTTTC
GAAGCTCGTC CCGGCAGTAC CCACGGCTAC GATATTTTTG ATCCGACCCG AATCCGCGGG
GAATTGGGGG GCGCCGACGG TTTTGAGGCG GTGCTGGAGA ACGCTCGCGA TCTGGGACTG
GCCTGGGTCC AGGATATTGT TCCCAACCAT ATGGCCCTGG ACAGCCGTAA CCCCTTTGTG
CGCGATGTCC TGGCCAAGGG GACAGAGAGC CGCTACAGCG GCCTGTTTGC CATCAATTGG
GAACACCCCG ATCCCGTCTT CAACGGCCGA CTCAGCCTCC CGGTGCTGGG CGAACCTTAC
GGAGAGGCAC TGCATTCCGG GCGTTTGCAC TTTGAGATAG AGAACGGCCA TCTTGTTCTG
GCCTATTTCG AGCACCGGTT TCCTCTGGGA CCAAAAGGGG TCCGGGCGAT CCTTCGTGAG
ACGCTGCCCC GGCTTGAGCG GGGGGAGGTG GCCACTCTGG TGACCCGGGC GCTGCATCTG
CTGGCTGATG CCCGTTTTGA CCAGGCTGCG CAGTGGCTGG CCGAGCAATG TGCGGCCAAG
CCCGACCTGG AAAAGGCCTT GGACCGGACC TGTTCGGAGA TGGCGGTGGG GTCGCGGCAC
AGCGTTATCG CTAACGAGGC CTATGCCCCG GTGTGGTGGA AGACCGCTGC CGTATGCCTG
AACTACACCC GTTTTTTCTC TATCAACGAT CTTATCCGTG TTCGTGTTGA AGATCCGGAT
GTCTTTCAGA CCACGCACAC GCTCTTGCGT GACCTGCTGC GCCGCAATCG TGTTCAGGGG
CTCCGGGTCG ACCATATCGA CGGATTGCGG GCACCGAAGG AGTATTTGCA TCGACTGCAG
ACACTCGGAG CCGGACCGGT CTGGGTGGAG AAGATCCTCG GGCCGGAAGA ACGGCTATCG
CAGGATTGGC CGATCGCCGG CAGCACGGGG TACGACTTTC TGGCCTGGAC ACAGGGGGTG
CTCACAGACC CGGCGGGTGC CGAGGCGATG CGCGACGACT TTGCCCGCCT TAATGGGGAC
CGGGAACCGG AAGCGCTGGC TTTCGAGGCC AAAGAACAGG TCCTGTATGA AGAATTCGAA
GGCGATCTGC ACAACGTGGC CGCAGTCTTG CGGCAGTTGG CCGCGCATTT TCCGGCGGGG
CGGGATATGC TCGGTTCGCG TCTGGAAAAC GCCCTGGCGG CCGTCCTGGC GGGCATGCCG
ATCTACCGTT TGTACGGCGA GCACGAGACC CTGTCCGGCC AAGAATCTGT GGCGGTGGAC
ACCGCTGTTG CTCGGGCCCG GGACCGGCGC CCGGAACTCG ACAACGAGAT CATGTTTCTA
GAGTCCGTTT TGCGCTGGCA CGGTTTCACG GAGGTGCTGC CGCGGGCGCG CCGGTTGTGG
CGCGATTTCT GGCAGCGGTT TCAGCAACTC GCCAGCCCGC TGACCGCCAA GGGGATCGAA
GACACCCTGC TGTATCGCTA TTTTCCTGTG GCTGCCAGCG CCGAGGTCGG CTGCGAACCC
TCCGCACCCG CACGAACTCC GGCCGCGTTT ACCGACTGGA TGCAAAACAG AGTGGCCCGC
TGGCCGCGTT CCATGAACAC CACAGCCACC CATGACACCA AGCGTGGCGA GGACGTGCGG
GCCCGGTTAA CGGCCTTGTC GGAGTTCCAT CAGGAGTGGC AACAGATGTG GCCAAAATGG
CGGGAGCTGA TGGAGCCGCT GTGCGAAACT GTCGGCAACG TCCGCACGCC CGACATTGCG
GAACAATATT TCATTCTGCA GACCCTTCTG GGGACCTGGC CGCTGGATCA TGACCCGGAC
GCCTCGTATA CCGGTCGTCT GCAGGAATAC ATGTATAAGG CCCTGCGGGA GGCGAAGCGC
CATTCGTGCT GGACAGCTCC AGATACCGAG TACGAAGCGA CGGTTGCCCG GTTTGTGCAC
CGATTGCTTG AGGCCCCGGA AGGGGCTCCG TTACGGGACG CTCTGGCCCC CTTTGCCGCT
CGGATCGGTT TTGGCGGGAT GCTCAACGGT TTGGCCCAGG TGGTCCTGAA GTGCACATTG
CCGGGGATTC CGGATGTCTA CCAGGGATGC GAGTATTGGG ATTTGTCCCT GGTCGATCCG
GACAATCGGC GTGACGTGGA CTTTGATCGC CGACGGGAGA GTCTGGCCGC CGTACGGCAG
GCTGTCCAGG AGGATCCGGT GCAATGCTGG TGGGATGTGT GCGCCACCTG GACCGACAGC
CGGATCAAAC AGCTCCTCTT GCACCTCTGT TTACAGACTC GCAACCGGTA TCCTGACCCC
TTTGTCCAGG GCGAATTCGT GTCCCTGTCG GTGGAGGGCG AATTTCAGGA CCATGTGTTG
GCATTTTTGC GCCATTACGG TCACACCTGG GTTTTGGCGG CTGTACCGCG CTTGCCGAGG
GGTGTCGCCG GGGCACAAGC CTGGCCGGTG GGAGAGCGGT GGGGGGAAAC CTCGATCGTT
CTGCCTCGGG TGACCTGCGG GGAGTGGCAT TGCCAATTGA CCGGGGCCCG CCACACCACC
GGACAGCGGC TTCCGGTGCA GCAGGTGTTC CAGGAACTGC CCCTGGCGCT CTGGGTCACC
GAACGTGAAG GGGGGCAGTG TCCGGTTTAA
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| Protein sequence | MIRSTYRVQL HPERGFASLD KDLEYLRDLG IHAVYASPVF EARPGSTHGY DIFDPTRIRG
ELGGADGFEA VLENARDLGL AWVQDIVPNH MALDSRNPFV RDVLAKGTES RYSGLFAINW
EHPDPVFNGR LSLPVLGEPY GEALHSGRLH FEIENGHLVL AYFEHRFPLG PKGVRAILRE
TLPRLERGEV ATLVTRALHL LADARFDQAA QWLAEQCAAK PDLEKALDRT CSEMAVGSRH
SVIANEAYAP VWWKTAAVCL NYTRFFSIND LIRVRVEDPD VFQTTHTLLR DLLRRNRVQG
LRVDHIDGLR APKEYLHRLQ TLGAGPVWVE KILGPEERLS QDWPIAGSTG YDFLAWTQGV
LTDPAGAEAM RDDFARLNGD REPEALAFEA KEQVLYEEFE GDLHNVAAVL RQLAAHFPAG
RDMLGSRLEN ALAAVLAGMP IYRLYGEHET LSGQESVAVD TAVARARDRR PELDNEIMFL
ESVLRWHGFT EVLPRARRLW RDFWQRFQQL ASPLTAKGIE DTLLYRYFPV AASAEVGCEP
SAPARTPAAF TDWMQNRVAR WPRSMNTTAT HDTKRGEDVR ARLTALSEFH QEWQQMWPKW
RELMEPLCET VGNVRTPDIA EQYFILQTLL GTWPLDHDPD ASYTGRLQEY MYKALREAKR
HSCWTAPDTE YEATVARFVH RLLEAPEGAP LRDALAPFAA RIGFGGMLNG LAQVVLKCTL
PGIPDVYQGC EYWDLSLVDP DNRRDVDFDR RRESLAAVRQ AVQEDPVQCW WDVCATWTDS
RIKQLLLHLC LQTRNRYPDP FVQGEFVSLS VEGEFQDHVL AFLRHYGHTW VLAAVPRLPR
GVAGAQAWPV GERWGETSIV LPRVTCGEWH CQLTGARHTT GQRLPVQQVF QELPLALWVT
EREGGQCPV
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