| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0037 |
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| Symbol | |
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| ID | 8417839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 44682 |
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| End bp | 46526 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036600 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_003196917 |
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| Protein GI | 258404175 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGG TTCAGGAATT GGGCGCCTGG TATGCGCCGG AAGCGACCCG ATTTACGGTC
TGGGCGCCGT TGCGGTCATC CGTTGAGCTG CGGCTTTTCG ACCCTGAGGA GCGTCGCGTG
GAAATGGCGT TTGCCGCCGG AGACGGCTGC TGGCGGGCCG AGGTGCCCGA TGTGGCTCCC
GGTACACGGT ACTCCTTTGT CCTCGACGGG GACCTCGAAC GGCCGGATCC GGCCTCTTTC
GCCCAGCCCG ACGGGGTTCA CGGTCCCTCG GTCGTCGTGG ACCATTTCTC GGAGACACGG
AGTGCGGCAA GTTGGGCCGG TCCGCAATGG GAGGAGTCGG TTTTTTACGA ACTCCATGTC
GGGACATTTA CGGAGCAGGG GACCTTTGAA GCCATTATCG GCCGACTTCC GTCGCTCAAG
GACCTGGGAG TGACCTGTCT CAGTCTCATG CCGGTGGCCC ACTTCCCCGG TCAGCGCAAC
TGGGGGTATG ACGGTGTCTA TCCCTTCGCA GCCCATACCA CATATGGCGG GGTGCAGGGA
TTGAAACGCT TGGCGGACGC CTGCCACAGT CTCGGCCTGG GGATTGTTCT CGATGTCGTC
TACAACCATT TCGGACCCGA GGGGAATTAT TTGCGCGATT TCGGGCCCTA TTTCACGGAT
GTCTACCACA CGCCCTGGGG GGAGGCGGTT AATTTTGACG GCCCTTACAG CGATGGGGTG
CGCAAATATT GTATTGAAAA CGCGTTGTAC TGGCTTAAGA CCTGTGATCT GGACGGATTA
CGCCTGGACG CGGTTCACGC CATTTATGAT GCTGCGGCCG TGCCTTTTCT CGAAGAGCTC
ACTCGCGAGG TTGACGCCCT TTCGCTGGAC AGCGGTCGCC AGCGGTGGCT CATCGCGGAA
TCCGACCGGA ATGATGCGCG TTTTCTTCGC CCTTCCGAGC AGGGTGGCCT CGGCCTGCAT
GCCCAATGGA ACGATGATTT CCACCATGCC CTGCACGCCT TGGTGACCGG GGAGAGGCAT
GGCTATTATC AAGATTTCGG GCGGGTGGAG GATCTGGGCC AAGCTTGGCG GCAAAATTAT
GTCTACAGCG GGCAGTATTC GCCGTTTCGT AAGCGCCGCC ACGGTAACTG CGCTGTGGAC
CGGGCCAAAT CGCAATTTGT GGTTTGCAGC CAGAATCACG ATCAGGTCGG CAATCGGTTG
CGCGGTGACC GTCTGAGCAC GATGGTCTCC TTCGAGACCC TCAAGGTGGT AGCCGCGGCC
CTGTGTCTGA GCCCCTTTCA GCCTATGCTG TTCATGGGCC AGGAATATGG GGAAAAGCGG
CCGTTTCCCT ATTTCATCGA CCATACCGAT CCAAAGCTTG TGCAGGCTGT TCGCCAGGGC
CGGAAAAAAG AATTTCAGGC CTTTTGGCGT GGCACGCCCC TTGATCCCAA GGCCGAGACA
ACCTTTACCA GCGCGGTTCT CAACTGGGAG ACCCAAGACG AGCGGGCCCG GCAATTGTGG
GCCTGGTACA AGCGCCTCCT TGCCTTGCGC CGGTCGCATC CGGTCCTGGG GCCGGATATG
GCCGTGGCCC GAGAAGTCCG CGAAAGTGCG ACGCCGGCGT GCTTGTGGGT CCATGCCCGG
CGGGCAGAGA CTGAAGTGGT GCTGTACTTC GCCTTTGGGG ACCAGCCGGA AGCGCCGGCG
CCCTGGGAGC TGCCTGAAGG AACGTGGCAG CGGTTGGAGG ACAGCAGCGC CCGTCGTTGG
GGCGGTCCGG GAACGCACGG TCCGGAAGAA CTTTGCCACC CCCAGGCCCC GCAATTCCAC
GCCCGGCAGG TCCAGCTCTG GGAGAGAGTA GCGAGGAAAG AATAG
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| Protein sequence | MNVVQELGAW YAPEATRFTV WAPLRSSVEL RLFDPEERRV EMAFAAGDGC WRAEVPDVAP
GTRYSFVLDG DLERPDPASF AQPDGVHGPS VVVDHFSETR SAASWAGPQW EESVFYELHV
GTFTEQGTFE AIIGRLPSLK DLGVTCLSLM PVAHFPGQRN WGYDGVYPFA AHTTYGGVQG
LKRLADACHS LGLGIVLDVV YNHFGPEGNY LRDFGPYFTD VYHTPWGEAV NFDGPYSDGV
RKYCIENALY WLKTCDLDGL RLDAVHAIYD AAAVPFLEEL TREVDALSLD SGRQRWLIAE
SDRNDARFLR PSEQGGLGLH AQWNDDFHHA LHALVTGERH GYYQDFGRVE DLGQAWRQNY
VYSGQYSPFR KRRHGNCAVD RAKSQFVVCS QNHDQVGNRL RGDRLSTMVS FETLKVVAAA
LCLSPFQPML FMGQEYGEKR PFPYFIDHTD PKLVQAVRQG RKKEFQAFWR GTPLDPKAET
TFTSAVLNWE TQDERARQLW AWYKRLLALR RSHPVLGPDM AVAREVRESA TPACLWVHAR
RAETEVVLYF AFGDQPEAPA PWELPEGTWQ RLEDSSARRW GGPGTHGPEE LCHPQAPQFH
ARQVQLWERV ARKE
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