Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0029 |
Symbol | |
ID | 8417831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 31973 |
End bp | 32836 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645036592 |
Product | periplasmic binding protein |
Protein accession | YP_003196909 |
Protein GI | 258404167 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGG CGGGCCCGGT TCACGCCGGG CCCGTGCTCA CCGACCAGGC CGGGCGCCAG GCGGCAGTGC CGGAGGATCC GCAACGGGTG GTCTGCCTTG CTCCGAGTCT GACCGAGACC GTGTTCGCCC TCAAGCAGGG AGAGCGGGTG GTCGGGGTCA GCCAATTCAG CGATTACCCG CCCCAGGCAG CAAAGCTGCC CCGGGTGGGC AGTTACGTGC GCCCGGAATT GGAGCGCATT CTGGCCCGCA AGCCGGATCT CTGCCTGGCG GTCAAGGACG GCAACCCCCG GCAGGTCGTC GACCGTCTGG AGCAGTTCGG CATCCCGGTC TACGCCTTTG CTCCGTATTC CCTGAAGCAG GTCCTGGAAA TGGTCCCTAG GCTGGGACAG ATTCTGAACT GTCCCGATCA GGCCGAGATC CTGCACCGCA GACTGTCTCA CAGCATTGAT GCGGCCCGCG CCCGGGCAGA GGCCGCGTCG TCTCGTCCCC GTGTGCTGTA TCTCGCCGGG CTGGCCCCGC TCATCGGGGT CGGGGGCGAT ACCTATCTGC ACGAACTCAT CGCCACTGCC GGGGGGAGCA ATGTCACCGT TGATTCCGCT GGATATCCGC GGTTGAGCTA TGAAGACATT CTCCGTCTCG CTCCGGATGT GGTCCTTTTG CCGAGCATGG GCGGCCGTGA ACGGGCTGTG GAGGCCAAGA AGCGGCTGCA ACGCTGGGAA CATCTGCCGG CTGTGACCCA GGGCCGGGTT CATATCGTGG ACGCGGACCG CTTCAACCGC CCTGGGCCGC GTCTCGTGCA AGCCCTGGAG ACGCTGACGG CGCTTTTGCA TCCTGGCGCT GAGGCCGTTA TGGAGTCGAA ATGA
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Protein sequence | MALAGPVHAG PVLTDQAGRQ AAVPEDPQRV VCLAPSLTET VFALKQGERV VGVSQFSDYP PQAAKLPRVG SYVRPELERI LARKPDLCLA VKDGNPRQVV DRLEQFGIPV YAFAPYSLKQ VLEMVPRLGQ ILNCPDQAEI LHRRLSHSID AARARAEAAS SRPRVLYLAG LAPLIGVGGD TYLHELIATA GGSNVTVDSA GYPRLSYEDI LRLAPDVVLL PSMGGRERAV EAKKRLQRWE HLPAVTQGRV HIVDADRFNR PGPRLVQALE TLTALLHPGA EAVMESK
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