Gene Dret_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0029 
Symbol 
ID8417831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp31973 
End bp32836 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content66% 
IMG OID645036592 
Productperiplasmic binding protein 
Protein accessionYP_003196909 
Protein GI258404167 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGG CGGGCCCGGT TCACGCCGGG CCCGTGCTCA CCGACCAGGC CGGGCGCCAG 
GCGGCAGTGC CGGAGGATCC GCAACGGGTG GTCTGCCTTG CTCCGAGTCT GACCGAGACC
GTGTTCGCCC TCAAGCAGGG AGAGCGGGTG GTCGGGGTCA GCCAATTCAG CGATTACCCG
CCCCAGGCAG CAAAGCTGCC CCGGGTGGGC AGTTACGTGC GCCCGGAATT GGAGCGCATT
CTGGCCCGCA AGCCGGATCT CTGCCTGGCG GTCAAGGACG GCAACCCCCG GCAGGTCGTC
GACCGTCTGG AGCAGTTCGG CATCCCGGTC TACGCCTTTG CTCCGTATTC CCTGAAGCAG
GTCCTGGAAA TGGTCCCTAG GCTGGGACAG ATTCTGAACT GTCCCGATCA GGCCGAGATC
CTGCACCGCA GACTGTCTCA CAGCATTGAT GCGGCCCGCG CCCGGGCAGA GGCCGCGTCG
TCTCGTCCCC GTGTGCTGTA TCTCGCCGGG CTGGCCCCGC TCATCGGGGT CGGGGGCGAT
ACCTATCTGC ACGAACTCAT CGCCACTGCC GGGGGGAGCA ATGTCACCGT TGATTCCGCT
GGATATCCGC GGTTGAGCTA TGAAGACATT CTCCGTCTCG CTCCGGATGT GGTCCTTTTG
CCGAGCATGG GCGGCCGTGA ACGGGCTGTG GAGGCCAAGA AGCGGCTGCA ACGCTGGGAA
CATCTGCCGG CTGTGACCCA GGGCCGGGTT CATATCGTGG ACGCGGACCG CTTCAACCGC
CCTGGGCCGC GTCTCGTGCA AGCCCTGGAG ACGCTGACGG CGCTTTTGCA TCCTGGCGCT
GAGGCCGTTA TGGAGTCGAA ATGA
 
Protein sequence
MALAGPVHAG PVLTDQAGRQ AAVPEDPQRV VCLAPSLTET VFALKQGERV VGVSQFSDYP 
PQAAKLPRVG SYVRPELERI LARKPDLCLA VKDGNPRQVV DRLEQFGIPV YAFAPYSLKQ
VLEMVPRLGQ ILNCPDQAEI LHRRLSHSID AARARAEAAS SRPRVLYLAG LAPLIGVGGD
TYLHELIATA GGSNVTVDSA GYPRLSYEDI LRLAPDVVLL PSMGGRERAV EAKKRLQRWE
HLPAVTQGRV HIVDADRFNR PGPRLVQALE TLTALLHPGA EAVMESK