| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0025 |
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| Symbol | |
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| ID | 8417827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 27177 |
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| End bp | 28058 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036588 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_003196905 |
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| Protein GI | 258404163 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGT ATCTCTGGAT TTCGGCCTTG CTTGCGGTCC TCGTCTGGAC CGGTGGTGCG
GGTTGGGCGA CAGCTGCCGA ACTCACGGTC ACAGTCAGTA TCTTGCCGCA AAAGGCCATT
GTTGAGGCCA TCGGGGGCGA GGACGTCCAG GTCCAGGTCA TGGTTCAGCC TGGAGCGAGT
CCGGCCACAT ACGAACCAAG CCCCCGGCAA ATGGCCGAAC TCCAGCGTTC GTCGGTGTAC
TTCGCTATCG GGGTTCCTTT TGAAAAGGCT TGGCTGCCAC GGTTGCGCCA GGGCCATTCC
GATTTGGAGG TCGTGCATCT CGAAGACGAA GTGGTTCGGC GCTCCATGGC CAGGGAGGTC
GGAGCCAAGG GGCATGACCA CGGCTCCGGG ATGCCGGATC CCCATATCTG GCTCAGTCCG
CCCCTGGTGC GCACCTTTTC CGCAAGCATC GCCGAACATC TGGCCGAGGC CCTGCCGTCG
CAGGCCGCAC AGATTCGGAG CCGCTACGTC AGGTTCGCCG CCTCGGTCGC TGCCTTGGAC
GCCGAACTCG CCTCGAAGCT GGCGCCGCTT GCCGCCAATC ACCCCCATTT CCTTGTCTTT
CACCCCTCCT GGGGCTATTT TGCAAAGGCG TACGGGCTTG TGCAGACCCC GGTGCAGATC
GAGGGCAAAC AGCCGAGTCC CCGGGCCCTG CAGGAACTGG TACGTTTGGC CGAAGAACTC
GATTTACAGA CTGTCTTCGT CCAACCGCAA TTTTCCCGGA AAACGGCCCA GGTCGTGGCA
GACCAGATCG GCGGCCAAGT CGTGGAACTC GATCCCCTTG CGGCTGATTG GGCGTCAAAC
CTGCGACGCG TTGCCGAGGT CATGCTCAGG GAGTTGTCAT GA
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| Protein sequence | MRLYLWISAL LAVLVWTGGA GWATAAELTV TVSILPQKAI VEAIGGEDVQ VQVMVQPGAS
PATYEPSPRQ MAELQRSSVY FAIGVPFEKA WLPRLRQGHS DLEVVHLEDE VVRRSMAREV
GAKGHDHGSG MPDPHIWLSP PLVRTFSASI AEHLAEALPS QAAQIRSRYV RFAASVAALD
AELASKLAPL AANHPHFLVF HPSWGYFAKA YGLVQTPVQI EGKQPSPRAL QELVRLAEEL
DLQTVFVQPQ FSRKTAQVVA DQIGGQVVEL DPLAADWASN LRRVAEVMLR ELS
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