| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0021 |
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| Symbol | |
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| ID | 8417823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 22750 |
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| End bp | 24351 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645036584 |
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| Product | SMC domain protein |
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| Protein accession | YP_003196901 |
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| Protein GI | 258404159 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAC TTCTTCGCAT CCGCAATCTG GCCCTGATAC AAGATCTGGA AATGGAATTC
GACCCTGGCT TGAACGTTCT CACAGGCGAA AGCGGGGCCG GAAAATCATT CATCCTCAGA
GCCCTTGATT TCATTCTCGG AGAGAAACTC CAGACCAACC ACGTCCGTCC CGGCGCGGAT
AAAGCCGTGG TCGAAGCGAT CTTTCACCTG GAGGGGCAAG AATATGTCCT GCGCCGTGAA
CTCAACTCCG CCACAGGACG CAGTCGCGTC TACATCAATG ACGATCTGAG TTCGCAAGCC
AAAATCCGGG CCCTTCGCCC CAGTCTGATC ATCCATACCA GCCAGCACGG CCAACAACAG
CTCCTCAATC CGAATTTCCA CACCCGGCTT CTTGACGGCG ACATCCCCCG GGAACTTCTG
GGAACCAAGG AGGACTTGCT CAGTCGCTAC AAGGACATCC TGCGCAGGCT GGAACAGCTC
GACCAGTCCA CGCAAGATCT CGACGCCAAG CGAGAACTCC TGGAATACCA GCAACAGCAA
ATCGACCAGG TCGGGCCCGA GCGTGGCGAA GAAGAACAGC TCCTTGAACG CAAGACCACC
TTGCGCGAGC AGGCGGCAAG CCAGCAGGCG GTACAAAACT GTCTTGAAAT CTTAAACGGG
GCCGGACAAC CAGGAGCGCT TGATTTGGCG GGAGATCTCC AGCGCGCCTC CCAATCGCTG
CAGAGTATCA ATGAAGGGCT GGGCGAACAC GCCCAACATC TCCAGGAGTG GTACGAATAC
CTCAAGGAAT TGGAAACCGA ACTCCGTTCC CAACCGCTGC CTTTCGACAG CACCCAGGAG
CTTGAAGGAA TCGAGGCCCG CCTCTGGGAA CTCGCCCAGC TCCAACGCCG CTTGAACCGG
AATCTGGACC AGATCTGCGA CCTGCATGAA GAAATTGAGG CCACCCTTTC CCATCGGGAT
CAGATCGGCC TCGAGCGCCA ACAGCTTGAA CGGCAGTCCC AAGAAATGCA TGCCGAATTG
ATTCAGGCCG TTCAGGAGGT CAACGCCGCC CGAGAGCACA CCGCCTCCCG ATTGGCCGAA
CAACTCCGCC AGGAACTCGT CCAGCTCGGT TTCGCCGAAG AAATCCAGAT TTTTTTCGCC
CTCCACGACC ATGAAGTCGC TCCCGGCATC TGGGAAAAAC GGGCCCGTTT GCAGTGGGTG
CCCAATCCCG GCCAGCCGGT TCAGGCCTTG GACGAAATCG CCTCGGGCGG TGAATTGTCC
CGTTTTTTAC TGGGCCTGGT CTGCCTGCAA TCCACACGCG AGCTGCCGAC CCTCCTGTTT
GACGAAGTAG ATGCCGGTGT CGGCGGTGTA ACACTCAACA GCGTCGGCCA GCGGCTCACG
GAATTGTCCC GGCGCCAACA GGTGGTCCTT ATTTCCCATT GGCCGCAACT CGCCAGCCGA
GGCCAGCGCC ACTTTCAGGT CGCCAAGGAG ATTGTGGACG GGGAAACCTT CACCACCTGT
CACGAGCTCG ATGCCCAGGC CCGTTTCGAT GAATTGGCGC GCATGGCTGG CGGTGACGAG
CAAGGCCTTG CCTTCGCCCA GCAACTGCTG CACAATCAAT AA
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| Protein sequence | MLELLRIRNL ALIQDLEMEF DPGLNVLTGE SGAGKSFILR ALDFILGEKL QTNHVRPGAD
KAVVEAIFHL EGQEYVLRRE LNSATGRSRV YINDDLSSQA KIRALRPSLI IHTSQHGQQQ
LLNPNFHTRL LDGDIPRELL GTKEDLLSRY KDILRRLEQL DQSTQDLDAK RELLEYQQQQ
IDQVGPERGE EEQLLERKTT LREQAASQQA VQNCLEILNG AGQPGALDLA GDLQRASQSL
QSINEGLGEH AQHLQEWYEY LKELETELRS QPLPFDSTQE LEGIEARLWE LAQLQRRLNR
NLDQICDLHE EIEATLSHRD QIGLERQQLE RQSQEMHAEL IQAVQEVNAA REHTASRLAE
QLRQELVQLG FAEEIQIFFA LHDHEVAPGI WEKRARLQWV PNPGQPVQAL DEIASGGELS
RFLLGLVCLQ STRELPTLLF DEVDAGVGGV TLNSVGQRLT ELSRRQQVVL ISHWPQLASR
GQRHFQVAKE IVDGETFTTC HELDAQARFD ELARMAGGDE QGLAFAQQLL HNQ
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