| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0013 |
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| Symbol | hisS |
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| ID | 8417815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 13779 |
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| End bp | 15038 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645036576 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_003196893 |
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| Protein GI | 258404151 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA TCAAGAAAAT CAAAGGTTTC AACGATCTTT TTCCTCCTGT GAGCGCTATT
TACAGCCGGA TGGAACAAAC CGCTCGGGAG GTTTTCAGCC GTTACGGGTA CTACGAAATC
CGGGTGCCCT TGTTGGAAAA GACGGAGCTC TTTGCCCGTT CTATCGGTGA TGAGACCGAT
GTCGTGCAGA AGGAGATGTA CACCTTTCCC GACCGCAAGG GGCGGTCGTT GACCCTGCGG
CCTGAAGCAA CAGCCAGCGT GGTCCGGGCC TATATCGAAA ATAAGCGCTA CGCCAGTGAA
TCGGTGAGCA GGATGTTCAC CTTCGGGCCC ATGTTTCGGT ATGAGCGTCC GCAAAAGGGA
CGTCAGCGCC AATTCCACCA GGTCAATTGC GAATTGCTCG GCGCAGAGGC CCCCCAATCG
GACGCCGAGT TGATTCTCAT GTTGTGGGAG TATCTGCAGG CCCTGGGCTT GGACGGCTTG
CACCTGGATT TGAATTCTTT GGGGTGTCGG GAGTGCCGCC CAGCCTACCA CGAGACGTTG
GGCTCCTATC TGGCCGGGGT CGATGCCGAC GAGCTTTGCG ACGACTGCCG GCGCCGCAAG
ACCACCAACC CCCTGCGGGT CCTGGACTGC AAGGTTGAGG GGTGCCGCTC TGTAATGCAG
CAGGCCCCGC GTCTGGCCGA CCACCTGTGT TCCGGGTGTC AATCCCATTT CGCCTCCGTG
CGCACCATTT TGGACCGCGC CGGCATTCCG TACACCATCA ATCCGCGTCT CGTGCGGGGG
CTGGACTATT ACCAGCGGAC CACTTTTGAA GTCGTGGCCG AGAATATCGG TGCCCAAACC
GCTGTGGCCG GCGGGGGGCG TTATGATGGA CTGGTCAGCG ATCTCGGCGG TCCAGCCCTG
CCCGGCACCG GCTTCGCCTG CGGTATGGAA CGGCTGGCCC TGCTGCTCCA GGAACAGGAG
CAACCCGGTA CCCCGGTGGA TTTTTTTCTG GCCGTGCTCG ACGACGAGGC CCGTGACGAG
GCTATTCTCC AGGCTCAGCA ATTGCGGAAA CAGGGCCTGG CCGGAGAGGT CGGCTATGAG
GCCAAAAGTC CCAAAAGCCA CTTGCGCCAC GCCAACAAGG CCGGAGCAGC GTATTGCCTC
TTGCTGGGCG GGCAGGAACT GCAAGAAAAG GCTTTTGTGG TCAAAAATAT GCAAAGCGGG
GCCCAGGAGA CCGTCTCCTG GGAGGAGACG GGGCGGGCCC TGCGCCAGCA GCGGGTCTAA
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| Protein sequence | MSTIKKIKGF NDLFPPVSAI YSRMEQTARE VFSRYGYYEI RVPLLEKTEL FARSIGDETD
VVQKEMYTFP DRKGRSLTLR PEATASVVRA YIENKRYASE SVSRMFTFGP MFRYERPQKG
RQRQFHQVNC ELLGAEAPQS DAELILMLWE YLQALGLDGL HLDLNSLGCR ECRPAYHETL
GSYLAGVDAD ELCDDCRRRK TTNPLRVLDC KVEGCRSVMQ QAPRLADHLC SGCQSHFASV
RTILDRAGIP YTINPRLVRG LDYYQRTTFE VVAENIGAQT AVAGGGRYDG LVSDLGGPAL
PGTGFACGME RLALLLQEQE QPGTPVDFFL AVLDDEARDE AILQAQQLRK QGLAGEVGYE
AKSPKSHLRH ANKAGAAYCL LLGGQELQEK AFVVKNMQSG AQETVSWEET GRALRQQRV
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