| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0005 |
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| Symbol | |
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| ID | 8417807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 3740 |
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| End bp | 4756 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645036568 |
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| Product | rfaE bifunctional protein |
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| Protein accession | YP_003196885 |
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| Protein GI | 258404143 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATC AATTGACCAG TTCCCTATTA GAGGGCGCTC TTCCACGCCT TCATGGTAAG
CGGGTGCTCG TGGTCGGTGA TGTCATGCTC GATCACTACC AGCAGGGCAG TGTTGAGCGT
ATCTCGCCCG AGGCACCGGT GCCTGTGGTC CACGTCGAAT CCGAGGAGTA TCGTCTCGGC
GGGGCGGGGA ATGTGGCCCG AAATATCAAG AGCCTGGGCG GCGAACCGAC GTTGTTGAGT
TGCGTTGGAC GGGATGCGGC CCGGGAGCGT TTGACCGAAC TGCTCAAGGC CGAAGCGGTC
CAGCATTCCC TGATCAGTGA TCCACACTGG CGCACGACTC GGAAGACTCG GGTCATGGCT
GCCGGCCAGC AGATCGTGCG CATTGACCAT GAACGTATGG GGCAGGCTCG GGATAGCGGA
CGGGAGCGCT TTGCGGCCTT GGTGGGGGAG ACGTTGCCGG ATTTCGATGT CGTCATCTTG
TCCGACTACG GCAAAGGGGC TCTGGACCAT TCCTTGCTCG AGGCTGTCCG CCGCAAGGCG
CACCACACCG GGGCCAAAAT CCTCATTGAT CCGAAAATCC AGAATTTTCA TCTCTATGCC
GAACCCTATC TTATTACCCC AAACCGCAAA GAGGCTGGAG AAGGAGCAGG GATGCGGGTC
GAGACCCGGG AGGATGTCCT CATGGCGGGA CGTCGCCTGC TGCGACGGAA CAATTGCGCC
AATGTCCTGA TCACCTTGGG CGGAGATGGC ATGGCCCTGT TTTTAGAGTC TGGAGAAGTC
TGGCACCTGC CGACCAGTGG GCAGAAGGTG TTCGATGTGA CTGGCGCCGG GGATACGGTG
ATCGGTGTCA CCGCCCTTGG CTTGTCTGCC GGGCTGGAAT TGGCCCATGC TTGCGCCCTG
GCCAATTTTG CCGCTGGGGT GGTCGTTGCC CAGGTCGGTG CAGCCAGTGT CACGGCTGAA
GAGCTGGGGC AGACATTGCA AGAAAAGCAT GGCCTGGCCT TTAGTCGCTG GGAATAA
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| Protein sequence | MPNQLTSSLL EGALPRLHGK RVLVVGDVML DHYQQGSVER ISPEAPVPVV HVESEEYRLG
GAGNVARNIK SLGGEPTLLS CVGRDAARER LTELLKAEAV QHSLISDPHW RTTRKTRVMA
AGQQIVRIDH ERMGQARDSG RERFAALVGE TLPDFDVVIL SDYGKGALDH SLLEAVRRKA
HHTGAKILID PKIQNFHLYA EPYLITPNRK EAGEGAGMRV ETREDVLMAG RRLLRRNNCA
NVLITLGGDG MALFLESGEV WHLPTSGQKV FDVTGAGDTV IGVTALGLSA GLELAHACAL
ANFAAGVVVA QVGAASVTAE ELGQTLQEKH GLAFSRWE
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