Gene Dtox_4307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4307 
Symbol 
ID8431322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4472782 
End bp4474347 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content42% 
IMG OID645036498 
Productintegral membrane protein-like protein 
Protein accessionYP_003193595 
Protein GI258517373 
COG category[S] Function unknown 
COG ID[COG5542] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00871901 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGT TAAAAAAGCG TTTAATTATA ATAAGTCTGC TTTTGTTATT GATAGTGGTA 
GTTTCCTGTC TCTATCATTC GGGATATTTA AGCACGGACA GCAAAAGCCT AAGCGCGGGA
TCGGCCCAGA CTCCCCCCGG CGACAGAATT AATCCGCCGG GGGGCATAAG CCAAAACCAC
GGGAATCATT TTCCGTTGCC TGATTCAAAT CACCGCATGG GAGCTCCGGG TGGGGGCATG
AGGGGAAACA GTATAAGGGC AGATTTAAAG TATAATACAC AATTGATTGG CTATTCGGTA
TTATTTTTAG GTGTATTGGT GTTGGCTTAT GTCATTGCTG AAAAAAATAA ATTAAGAATA
AAACCGGGTC GTGAAAGAAT TATAATGCTC AGCCTGCTCA TGACCGCACT GCTTGCACGG
CTCTGTTTGG CGGCGGTGCT GGAAGGCCAT CCTTTTGACC TTAACACCTT TAAAAGCTGG
GCATCTGCTG CGGCTGATAA TTTGCCGCAA GTTTATTCGG GCCACAGGTC AAGCGACTAC
CCGCCGCTTT ATATGTATGT GCTTTACTTA ATAGGAAAAA CAGCAAGCAT ATCGTCGATG
AGTAACTATT ACAATTTTCT TTTAAAGCTG CCTTCCATAC TGGCGGATAT GACTACTGCT
TTTCTGATAT ATAAATTAGC CGGAAAACGT CTTTCTGCAG AGCTCAGTGT CTTGTTAGCG
GCATTTTATG CCTTAAATCC TGCTGTTTTA GTCAACTCAA CCTTTTGGGG GCAGGTAGAT
TCATTTTTCA CAATGCTTGT TTTTTTTGCA GTACTGCTGC TTTCGGAAAA GAAGCCGGTC
CTTGCCGCGG CCTTTTTTAC TGCAGCTGTT CTGATGAAGC CGCAAGGAAT AATTTTTCTT
CCGGTTCTTT TCTTTGAATT TGTCAGGCAA AGAAATGTTA AGAGTTTTGT CCAAGCAATA
CTTGCTGCTT TTAGCACGGT CTTGATAGTG GTACTTCCGT TTTCCTTGGA AATGGGCTGG
CTTTGGATTT TTAAACTCTT TTCGGGCACT CTGGGAGAGT ACCCCTATGC ATCTGTTAAT
GCTTTTAACT TTTTTGCTTT GATTGGGAAA AACTTTGCAC AGGATGGCTC TGAATTGTTT
GTTCTCAGCT ATCACAGCTG GGGAATGATT TTTATAGTCT TGATTTCATT GTATGCCTGG
TTAGTGTATA TTAAAGGAAA CAGCATCAGC TTTGCCTCTC CGGCAGCACT TTTGCTGATA
GCAGGTGTGT TTACTTTTTC CACCAGAATG CATGAAAGAT ACCTGTTTCC CGCAGTAGCT
TTGTCGGTTC TGGCCTTTAT ATATCTAAAG GATAAAAGGC TGCTGCTGCT GGCTGCCGGG
TTTAGCTCAA CTGTTTATAT TAATACCCAT TATGTTCTTT ATGAAACAGT AAAAGGTATA
AACTCTGTGG CTTTTAATCC TGTCCTTATT GTCACATCTC TATTAAATGT GGTATTGTTT
GTATATCTGG TCAAGGTCGT TTTTGATATT GCTGTCAGAA AAAGAATAGA TACCTGCCGG
TGTTAA
 
Protein sequence
MSPLKKRLII ISLLLLLIVV VSCLYHSGYL STDSKSLSAG SAQTPPGDRI NPPGGISQNH 
GNHFPLPDSN HRMGAPGGGM RGNSIRADLK YNTQLIGYSV LFLGVLVLAY VIAEKNKLRI
KPGRERIIML SLLMTALLAR LCLAAVLEGH PFDLNTFKSW ASAAADNLPQ VYSGHRSSDY
PPLYMYVLYL IGKTASISSM SNYYNFLLKL PSILADMTTA FLIYKLAGKR LSAELSVLLA
AFYALNPAVL VNSTFWGQVD SFFTMLVFFA VLLLSEKKPV LAAAFFTAAV LMKPQGIIFL
PVLFFEFVRQ RNVKSFVQAI LAAFSTVLIV VLPFSLEMGW LWIFKLFSGT LGEYPYASVN
AFNFFALIGK NFAQDGSELF VLSYHSWGMI FIVLISLYAW LVYIKGNSIS FASPAALLLI
AGVFTFSTRM HERYLFPAVA LSVLAFIYLK DKRLLLLAAG FSSTVYINTH YVLYETVKGI
NSVAFNPVLI VTSLLNVVLF VYLVKVVFDI AVRKRIDTCR C