Gene Dtox_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4289 
Symbol 
ID8431303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4457066 
End bp4457827 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content41% 
IMG OID645036481 
ProductCRISPR-associated protein Cas5 
Protein accessionYP_003193579 
Protein GI258517357 
COG category 
COG ID 
TIGRFAM ID[TIGR02592] CRISPR-associated protein Cas5, Hmari subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA TTTCATTTCA CCTTAGGGGG AAAATGGCCC ATTTCAGAAG ATATTATGCA 
AATTCCTCCG CCCTTTCCTA TTCCATTCCT CCCAGGACTA CATTAATTGG CATTGTAGCG
GGTCTTTTGG GGTGGGAAAG AGATAAATAT TATGAGATTT TTTCTCTTAA CTCGTGCAAA
GTAGCCGTGG CTTCCTGTGC ACCGGTAAAA AAATGTATGC AGAAGCTAAA TTTATTAATG
ATAAAAAAAG CCGGAGATTT AAACGGTTCT GCCGAGCATC ACAGTCAGAC AGCCACAGAA
CTTATTATTC CTCAGAATAT TCGCACCGGA ATAATTGATT ATCAGGTTTG GCTGCACCAC
CGGGATAATA AAATAATGGA CATGTTGGGG AAGCTTTTGC AATTAGAGGG CCGGGGTTAT
AAGAGTCTTG GTATTTCTCT GGCGTTGGGA ACGGTATTTA ATTTAGGATG GGTGGATGAC
GGTTGTATTA TCGAGGGTGT AGAAAAAGAG AAGAGTAATG ATTTATCCAT TGCTTCTGTT
ATACCGGTTA AGAAATTAAT TGGCATTCAA ACAGAGCGAA TGGGTGCCGA TGAATACAGG
TTGGTTAAAG AGGAAATACC GTTGGAATTT GATTCCCAAA GGCATATTAC CGAGAGAGGG
CTGGGAAATA TGATGATAAA TTTAAACAGT AGTCCCATAC CCGCCGGGGT TGAGTCTTAT
GTCCAATTGG AGAACGGAAA GTGTATCATG TGGATGGAGT AA
 
Protein sequence
MKIISFHLRG KMAHFRRYYA NSSALSYSIP PRTTLIGIVA GLLGWERDKY YEIFSLNSCK 
VAVASCAPVK KCMQKLNLLM IKKAGDLNGS AEHHSQTATE LIIPQNIRTG IIDYQVWLHH
RDNKIMDMLG KLLQLEGRGY KSLGISLALG TVFNLGWVDD GCIIEGVEKE KSNDLSIASV
IPVKKLIGIQ TERMGADEYR LVKEEIPLEF DSQRHITERG LGNMMINLNS SPIPAGVESY
VQLENGKCIM WME