Gene Dtox_4258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4258 
Symbol 
ID8431272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4423880 
End bp4424989 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content39% 
IMG OID645036450 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_003193548 
Protein GI258517326 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCATT ATAGTAATTT ATACTCCAGT ATTTGTAGTT TTGAGGGCTT ATACCAATCC 
TACTTAAAGG CAAGAAAAAG AAAGAGATAT AGAAATGAAG TTTTAAAGTA TACCGCTAAT
CTTGGAGAAA ACTTAATTCA AGCCGAAGAA GAGTTAATAT CTAAATCTTA CAGAGTTAGT
CCGTATCGGA AATCCTTTGT GTACGAACCT AAGAAACGAC TTGTTATGGC GTTGCCTTTT
GGGGATCGGA TAGTGCAATG GTCTGTATAT AGGACACTAA ACCCGCTGCT AAATAAACGC
TATATAAGCC ACTCTTATGC TTGTCGTACG GGCTATGGTT CTCATAGGGC TGTTAAGCAA
CTTCAATATT GGCTGAGATA CCTGGAAAGA CGCCATGGGA GAATTTATGT CCTCAAAGCA
GACATGACAA AGTATTTTTA CCGAGTGGAT CATGACATTA TAATGAATAT TCTGGAGCGC
ATTATAGGGG ATTATGATTT GATATGGCTT TTAGAAGAAA TTGTCCGGTG TGAACATACC
TGGTTTGGTC TCCCATTGGA TGCGGAGGGC TTTGAATGTG AACTGACAGG TGAGGTCGGT
ATACCGATTG GGAATTTAAC CAGTCAGATG ATTGCTAATC TATATTTGAA TGAGCTGGAT
CAGTATGCCA AGCATAACCT GCAAATTAAA TACTATATGC GCTACATGGA CGACGTCTTA
ATACTTCACA ATGATAAAAA GTATCTTTGG CATATCAAGG AAGAGATTGA GGAGTTTCTA
GATCGCAACC TAAGGCTTAA GTTAAATAAT AAAACCTGCG TCAGAACCAA TACCCAAGGA
ATTGACTGGA TTGGGTACCG AGTTTGGCCT ACTCACGTTA AGCTAAGAAA ATCTACAGCC
CAAAGAATGA AGGCACGTTT AAAGTACCTG CAGGGGCTTT ATGCTGTAGG TGAAGCTGAT
TTTAAGGAAG TTAACGCCAC TGTGCAAAGT TATTTGGGTA TTCTGAAGCA CTGTGATAGT
TATAATTTAC GAGAAAAGTT ATTTGGTGAT CTGACTTGGG CGCGTGATAG CACGCAGCAG
TCACAATTAC AAGGAGAGAT TTTGTTATGA
 
Protein sequence
MKHYSNLYSS ICSFEGLYQS YLKARKRKRY RNEVLKYTAN LGENLIQAEE ELISKSYRVS 
PYRKSFVYEP KKRLVMALPF GDRIVQWSVY RTLNPLLNKR YISHSYACRT GYGSHRAVKQ
LQYWLRYLER RHGRIYVLKA DMTKYFYRVD HDIIMNILER IIGDYDLIWL LEEIVRCEHT
WFGLPLDAEG FECELTGEVG IPIGNLTSQM IANLYLNELD QYAKHNLQIK YYMRYMDDVL
ILHNDKKYLW HIKEEIEEFL DRNLRLKLNN KTCVRTNTQG IDWIGYRVWP THVKLRKSTA
QRMKARLKYL QGLYAVGEAD FKEVNATVQS YLGILKHCDS YNLREKLFGD LTWARDSTQQ
SQLQGEILL