Gene Dtox_4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4189 
Symbol 
ID8431203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4364276 
End bp4365178 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content51% 
IMG OID645036382 
Productaminotransferase class IV 
Protein accessionYP_003193480 
Protein GI258517258 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCGTT TCGTCCAGAT AAGCAGCACT CAGGATACCG GGCAACCGCC CGCCGCTCAA 
AAAACACCCG GTGATACAAC TTATGTCTGC TGCAACGGTG AAATTATTCC GGCAGAAGCA
GCTTCACTGC CGGCAGCAGA CAGGGGCTTA CTTTATGGCT ACGGGCTTTT TGAAACTTTC
ATGGTTAAAA AGGGCCGGGC GGTTTTTGTT GAGGAACACC TGCAGAGACT GAGCAGCTCC
GCGCCTAAAC TCGGTCTCTT ATTATCGGAA GAAGACTGTC AAACCGGAAT CATTAACGGT
ATAAACAGAG TTATAGAAAA GAACTGTTTA CAGGAGGGCA GTCTGCGTTT GACGGTTACT
GCGGGCTCGG AAAGCGAACG CAGGCCCGGT ATACTTATAA CCGTTAAAAA AGCCCCGGCA
TATCGCAGCG AGCATTACCA ACAGGGATTT CGGGCCGGTT TTCTGAAAAA CCCGAGGAAC
GAGCGCTCTC CCCTGGTTTA TCTTAAGTCT CTCAACTATT TGGAGAACCT TTTAGGAAGA
CAGGAGGCTA TATCCAGCAA CTGGAATGAA GGATTATTTC TAAACACTCA CGGATGTCTT
GCCGAGGGAA CTGTCAGCAA TATCTTTTTG GTAACCGGGG ATAAAGAGCT GGTTACTCCT
CACGTCTCTT CCGGCCTGCT GCCCGGAGTT ATGAGGGCTA AAGTGCTGCG GAAAGCCGCT
GCCGCCGGCT ATCGCTGCCG GGAAAGGGCT GTACTGCCGG AGGAGTTGTT TTCGGCCAAA
GAGTGTTTTC TGACTAACTC GCTGATGGTG GTCATGCCCC TGGTGGAAGT GGACGGGAAA
AGCATCGGAG ACGGTAAACC GGGTCAAGCA ACCGGAGAGA TCAGGGCTGG GCTGGAGATT
TGA
 
Protein sequence
MERFVQISST QDTGQPPAAQ KTPGDTTYVC CNGEIIPAEA ASLPAADRGL LYGYGLFETF 
MVKKGRAVFV EEHLQRLSSS APKLGLLLSE EDCQTGIING INRVIEKNCL QEGSLRLTVT
AGSESERRPG ILITVKKAPA YRSEHYQQGF RAGFLKNPRN ERSPLVYLKS LNYLENLLGR
QEAISSNWNE GLFLNTHGCL AEGTVSNIFL VTGDKELVTP HVSSGLLPGV MRAKVLRKAA
AAGYRCRERA VLPEELFSAK ECFLTNSLMV VMPLVEVDGK SIGDGKPGQA TGEIRAGLEI