Gene Dtox_4160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4160 
Symbol 
ID8431174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4338086 
End bp4340590 
Gene Length2505 bp 
Protein Length834 aa 
Translation table11 
GC content40% 
IMG OID645036353 
ProductS-layer domain protein 
Protein accessionYP_003193451 
Protein GI258517229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000123931 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0864092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAAAG TAATTTTAAT ATTGATTGCC AGTCTGCTAA TACTGCTGCC GACACAGGCT 
TTCGCCAAAG AATTCAGTGA TGCTAAAAGT CACTGGGCCT TACCGTCAAT CAGTGAGTGT
ACAGCTGTGG GGATAGTTGA GGGATATCCT GACAGTACCT TTAAACCGCA GAATTCGGTT
AGCCATTTGG AAGCCCTGGC CTTAATCATA AAAAGTATGG GACTGGAGGA GCAGGCCAAA
GCACTGGATT TAAAAAAAGG GGGTTACAGC TTTCCGCAAG GAGTTTCCTG GGGCAAAGAG
TACATCGCGA TGGCCGCTGA TAAATCTATA ATCAATAAAG AGAAAATGGC AAATTTGAAA
CAGGACGCGC CGACTACCAG GGTTGAGATT GCGGTAATGT GTGCCAATGC CCTGCATTTA
TCCGGGGATG CCGCGGAGAT GTCCTTTTCC GACAAAGAAG AAATACCGGA ATCATTGAGA
AGCAGTGTGG CCGGGGTTGT AAAAAACGGT ATTATGGTTG GTCAACCGGG CAATAAATTC
GCACCCTCCG ATAAGGTTAC CAGGGCGGAG ATTGTTACCA TGATCAGCCG CTTATTTGAA
AAAGGTTTAA TCAATCCTGA TCCCAGCAAT TACTTTATTA ATGAAGTTGC GGGAATTGAT
AAAACTAACC AGTTGATTGC GCTGCGTAAA TCAGATACTG TTACCCACCC GTATATTCTG
GCCGATGATT GCGTTATTTA TCGGGACGGT AAAAAGGCTG AGTTAGTGGA CTTTCAGGAA
AATGATAATG CAAAAATAGT TTTGAACGAC AAAGGCCGTG TAATATATTT AGCCCAATTT
ACCGGGCAGC TTCAGGCAAA TAACGGCACA AATACTGATA CAAATACCGG CACAAATACT
GATACTGGCT CAAATGTGAA TAATTCACAA TCATCGTTTT CAAGTGGCAG CGGTATGATT
GATTCCATAA TATATGGATA TCCAATTAAG GTTATAATAA CTAAAAGTGA AGGTGGTTCA
GACTTATATG AGCTTGAATC GGTTGTCAAG ATTTCAGTTA ACGGCGTGAC CAAAGACACA
GCATCACTGG TTAAAGGCAG CATAATCGAA TATGATTATA CCGGCAATAA AATAAGTGAA
ATCAGAGTGC ATTCGGCCTC ACTGGAAGAA ACAGGCAGTC AGAAGACTGA TAAGGCTTAT
ATAATCAATC TTACTTTTGA TCATTTGACA TTGCATTTTG AGAGCGGCTT GGAAATAGGC
TATTATATTG ATCAGAACGT TCATTTCTTT AAGGATAATC AACAGATAAG TATGAGTGGT
CTTAAAAAAG GTGATTTAGT GGAAGTGAAG AGGTATTCCA ACCGGGATGA ATTAATATCA
ATAACAATAA TGAGCGGAAA ACCCCGTAAA ATTTTCGGTA CAATTATATC TAATGTGGAT
AATTGCTTAA CTGTTGAAGA CTATGACGAT GTAGAGACCG ATTATGATGT GGGCAGTAAT
GTGGAAATAA CCAATAAAGA CGGTATTGAT CTTACGGTTA CAGACATAGA TATAGATGAT
AAAGTAGAAA TTACTCTGAC AGACAGCGGC AAAGTGGATT CTATAGTAGT TGACGAGTAT
GGTTCCAATA TCTCGGGGAC AATCATTACA CTGGATACAT CAGGGGACTA TTCTTTGACT
TTAGAGCGAA GCAGCGGCTC ATATAAAAAA TATGAGGTAA AAGATAATGT GAAGGTAAAA
GAAGGTACAA AATCTCTTGA TTATGATGAT CTGGCAGAGG GAAATGAGGT TAAGCTCTAT
ACAAACGGCA GCAATGAAGT GACCGATATA GTGCTTGTTG ACGACAGCAG AGTCATTAAA
GGTACTGTTG CATCAGTAGA TGATGAGGGC ACATATGGCA TAACTATAAA AAAACTGGAC
AAAATAACAT CTAACTATGA AGTGGATGAT GATGTAACAG TAAAAGAAAA TAGTAAATCG
CGTGATTTTT CTGATCTGGC TAAAGGCGAT GAAGTAGAAT TAACTATTGA TGACGATGAT
GTGGTAACGA AAATAATAAT TACCGAGGGT GACAGCTCAT CTGTTTCAGG CGTAATTACT
GATTTTAACT GGGATGATCA AGAGATTGCC ATTGAAGAAG ATGATGATGA GAATGATTAT
GATATAGCTG ACGACGCGAA GATTACTAAA GACGGTGATG AAATCGGCCC TGAGGATCTC
CTGATTGGTG CTGAAGTTGA ACTGGAGATA GAAGACGGTG AGGTTGTTGA GATAATTATC
GAAGACGATG AGGACATTGA GACCAGCGGT GAGATTACGA AAGTTTACAG CGATGCGATA
AAAATAGAAC AGTCCAGCGG CAATGAGTTT AAGCTCTATT TTGAAAGCGA TGCCTCATTG
GAGGATGAAG ACGGTGATGA TATGGATATT GATGATTTGG ATGTGGGGAC GGATGTTGAG
CTAAGGTTAA GGGACGGTAA AATTCGGAGT CTGAATGAAG TTTAG
 
Protein sequence
MRKVILILIA SLLILLPTQA FAKEFSDAKS HWALPSISEC TAVGIVEGYP DSTFKPQNSV 
SHLEALALII KSMGLEEQAK ALDLKKGGYS FPQGVSWGKE YIAMAADKSI INKEKMANLK
QDAPTTRVEI AVMCANALHL SGDAAEMSFS DKEEIPESLR SSVAGVVKNG IMVGQPGNKF
APSDKVTRAE IVTMISRLFE KGLINPDPSN YFINEVAGID KTNQLIALRK SDTVTHPYIL
ADDCVIYRDG KKAELVDFQE NDNAKIVLND KGRVIYLAQF TGQLQANNGT NTDTNTGTNT
DTGSNVNNSQ SSFSSGSGMI DSIIYGYPIK VIITKSEGGS DLYELESVVK ISVNGVTKDT
ASLVKGSIIE YDYTGNKISE IRVHSASLEE TGSQKTDKAY IINLTFDHLT LHFESGLEIG
YYIDQNVHFF KDNQQISMSG LKKGDLVEVK RYSNRDELIS ITIMSGKPRK IFGTIISNVD
NCLTVEDYDD VETDYDVGSN VEITNKDGID LTVTDIDIDD KVEITLTDSG KVDSIVVDEY
GSNISGTIIT LDTSGDYSLT LERSSGSYKK YEVKDNVKVK EGTKSLDYDD LAEGNEVKLY
TNGSNEVTDI VLVDDSRVIK GTVASVDDEG TYGITIKKLD KITSNYEVDD DVTVKENSKS
RDFSDLAKGD EVELTIDDDD VVTKIIITEG DSSSVSGVIT DFNWDDQEIA IEEDDDENDY
DIADDAKITK DGDEIGPEDL LIGAEVELEI EDGEVVEIII EDDEDIETSG EITKVYSDAI
KIEQSSGNEF KLYFESDASL EDEDGDDMDI DDLDVGTDVE LRLRDGKIRS LNEV