Gene Dtox_4137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4137 
Symbol 
ID8431151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4309092 
End bp4309922 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content45% 
IMG OID645036330 
ProductABC-2 type transporter 
Protein accessionYP_003193428 
Protein GI258517206 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000402525 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTCCC ATCAAGTTCA CCCCTCCTCA CCCGTAGCAA TGTTTACGAG CTTTTGGCGA 
AATCGTCATC TCATCTGGCA GATGGCTCGG CGCGAAATTG TGGGGCGTTA CCGCGGATCG
GTCATGGGCA TAGCCTGGTC ATTTTTTAAT CCGCTATTGA TGCTTTTTGT ATATACCTTT
GTTTTTTCCA CTGTATTTAA GTCCCGTTGG GGTGTTGGTG GGGAAGCAAG TAAGTCTGAT
TTTGCTATTA TTTTGTTTGT GGGAATGATC GTTCACGGTC TCTTAGCTGA ATGTGTCAAT
CGGGCGCCGG GACTGATTAT TTCCAATGTC AATTATGTAA AAAAAGTAGT TTTCCCCCTT
GAAATACTGC CCTGGGTGGT TTTGGGATCG GCGTTTTTCC ATAGCTTAGT GAGCCTATTG
GTGCTCATGA TAGCACAACT CTTTATAAAC CAGACCTTGC CCTGGACCAG CATTTTTTTT
CCGCTGGTAC TGCTGCCGCT TATTTTTGCC AGTATGGGCT TTGGCTGGTT TTTAGCTGCA
CTGGGTGTTT TTGTGCGCGA TATAGGGCAA ATTACAGGTG TTTTCACAAC AATATTAATG
TTTTTATCAC CCGTATTTTA CCCTGTGTCG GCGCTACCGA AGGCATATAA GACCTGGATG
CTGTTAAACC CGCTTACACT TATCATCGAA GAAAACCGCA AAGTATTGAT ATTCGGTAGT
TTGCCTGATT GGTCATCCTT GGTTATCTCA TTGTTGGTTG GACTGTTTAT AGCTGCCGTT
GGCTTTTGGT GGTTTCAGAA AACTCGGAAG GGGTTTGCTG ATGTCCTCTG A
 
Protein sequence
MNSHQVHPSS PVAMFTSFWR NRHLIWQMAR REIVGRYRGS VMGIAWSFFN PLLMLFVYTF 
VFSTVFKSRW GVGGEASKSD FAIILFVGMI VHGLLAECVN RAPGLIISNV NYVKKVVFPL
EILPWVVLGS AFFHSLVSLL VLMIAQLFIN QTLPWTSIFF PLVLLPLIFA SMGFGWFLAA
LGVFVRDIGQ ITGVFTTILM FLSPVFYPVS ALPKAYKTWM LLNPLTLIIE ENRKVLIFGS
LPDWSSLVIS LLVGLFIAAV GFWWFQKTRK GFADVL