Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_4116 |
Symbol | |
ID | 8431130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 4284791 |
End bp | 4286413 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645036311 |
Product | O-antigen polymerase |
Protein accession | YP_003193409 |
Protein GI | 258517187 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0014553 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000561153 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTTTAAGC GTAGTTGTAT TATAAATTCT TGCCTGTACT TGTGGAACTC TAGTTTAACA GCGCGCCTTT TATCTGCATT CTGGCTGGCT GTGACCGGCT GCTGGCAGTC CGGTTTTGTT TACCATACCG TGGCTGCGGA TGTGGTGGCT CAAAGCTTTT TGTACAGGCA GTTCAACCGC CTGACCGGTA AAATAGAGCA GCTGATGCCG CGAACTGCTC TGGCCGTAAG GGGGTTTTAT TGGCAAAACG GCCCCGGTAT GATAACCAGG CCGGTTTTTT GGTATTTGAT TGCGGGCATT GTCCTTTTAA CAGCTATACC GGCGGCCTTT ATTGACCGGC AGGCAGCCTT GACGATAGCG GCGGGTGTTT TAACTATGGC CGTGGTTTTC GCCATACCTG AGTCGGGCCT TTACCTGGCC GCACTGCTTT TGCCCTTCAC ATCTTTTAAT AACCTGGCCC TGCTCGGTGT ATTGACTGCA CTGGCCTATT CAGCCAGGGT TATTGCCGGG GGCAAGGTTG AGCTTTGCCG CAGCTCCATA TTGCTGCCGG TGCTGATTTT TTTTGCTGTT CTGGTATATG GCACTGTGAC CTCAGTGCTG CCCCGGAGCA GTGCCTATGA ATTTTCTATT TATGTGGCGG CCGTGATATA TTTGTTTTTA ATTATAAATA TGATTGACAA TAAACAAAAG CTGAGCCTCC TGTTAGGCTG CCTGGCACTG TCAGCCGCGG CGGTTGCGGC TGACGCCATA TATGATTATT ATTTCGGGGT CACCTTTGTT GATTTGCATA AGGGATGGGT TGATCCGGAG CTGAACCCGG ATATTAAAAA CCGCGCCTCG GCAGTGTTTG AAAATCCCAA TTTGCTGGCG CAGTATTTTG TTCTGGTGAT ACCCATTACC GCCTCTTTAA TTGCCGTGGT CAAAAGAATC GGCTATAAAT TTTTGCTCCT GGCCATAGCC TGCCTGGCCG GTACGGCACT GGTGCTCACC TATTCCAGAG GCGGTTTATA CGGGTTTGTT TTTGCCATGG CGGTTCTGGC TATGATCAGG GGTCCCAAGT TTTTACCCCT GTTTTTTGCG GCAGCTGTAA TCGGAGCCTT CTTTTTGCCT CACACAGTCA TAGACCGCCT GGCTACGGCG GATAATTTGA ATGACAGTTC GGTAGTTTAC CGTTTTGACA TCTGGAAGTC CACGCTTATG ATGATCAAGG ATTATTGGCT GACCGGAGTC GGTGTGGGCA CAGAGGCTTT TATGAGGGTT TATTATGTCT ATATGATGAA TTCAGCCATT ATGCCGCACG CGCATAACCT TTATCTCCAG CTTCTCAGCG AAACCGGCAT CTTCGGGCTG GCTGCTTTTC TTTTATTGAT GTACAAAATA TACCAGACTG TTTTCCGTCT GGTGTCGAGC AAGTTAAGTT ATATAAAGTG GTTGAATGCC GGAATAGCCG GTGCCATGGC CGGCTTTTTG CTGCAGTCGC TGTTTGACTA CGGTCTCTGG TATTATAAGC TGGGGGTTCT GTTCTGGATT TTGATAGGCG TATATATTGT GCTGGAGAAA CTTAACGCGC GGGAGAAAGG AGCGGTATTT GATGGTGAAA ATCCGCAAGG ACAGGGAAAG TGA
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Protein sequence | MFKRSCIINS CLYLWNSSLT ARLLSAFWLA VTGCWQSGFV YHTVAADVVA QSFLYRQFNR LTGKIEQLMP RTALAVRGFY WQNGPGMITR PVFWYLIAGI VLLTAIPAAF IDRQAALTIA AGVLTMAVVF AIPESGLYLA ALLLPFTSFN NLALLGVLTA LAYSARVIAG GKVELCRSSI LLPVLIFFAV LVYGTVTSVL PRSSAYEFSI YVAAVIYLFL IINMIDNKQK LSLLLGCLAL SAAAVAADAI YDYYFGVTFV DLHKGWVDPE LNPDIKNRAS AVFENPNLLA QYFVLVIPIT ASLIAVVKRI GYKFLLLAIA CLAGTALVLT YSRGGLYGFV FAMAVLAMIR GPKFLPLFFA AAVIGAFFLP HTVIDRLATA DNLNDSSVVY RFDIWKSTLM MIKDYWLTGV GVGTEAFMRV YYVYMMNSAI MPHAHNLYLQ LLSETGIFGL AAFLLLMYKI YQTVFRLVSS KLSYIKWLNA GIAGAMAGFL LQSLFDYGLW YYKLGVLFWI LIGVYIVLEK LNAREKGAVF DGENPQGQGK
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