Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_4109 |
Symbol | |
ID | 8431123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 4278759 |
End bp | 4279559 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645036304 |
Product | Protein-tyrosine-phosphatase |
Protein accession | YP_003193402 |
Protein GI | 258517180 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4464] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000306575 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATAGATG TGCATTCGCA TATTTTGCCG GGCCTGGATG ACGGTTCACC GGACCTGCAG ACCTCTCTGG CCATGGCCTC TGCCGCTGTG GAAAACGGTA TCGGTACGAT AGTAGCCACC CCGCATTTTA TACCGGGTGT TATGGAAAAC AGGAGAGACA AGGTGCTTGA GGCGGTCAGG GCATTGCAGT CTCACATAGA CAGGGAGAAG CTCCCCCTGA GCATCCTTCC CGGTACTGAG GCCTACTGTG ATATCGCCCT GCCCGCTCTG GTAAAAAGCG GGGAAGTGCT GACTGTCAAT GACGGCGGCA GATATTTATT GATGGAGCTT CCCATGGCCA CTGTTCCGCA GTATACGGAA CATGTAATAT ACGAGTTGAA ACTGCTGGGA ATAACTCCTG TTATTGCTCA TCCCGAACGC AACAAGGGGA TAGCTTCCGA TCCGTCTTTT TTGTACAAGC TGGTCAGCAA TGGGGTACTG GCACAGGTAA ATGCCACCAG TCTGCTGGGT GAGTACGGAG AATCGGTAAA AGCTGCCGCC CTGCAGTTTT TGAAATTAAG GTGGGTTCAT TTTTTAGCCA CTGATGCCCA TTCACCGGGA AGGAGACTGG CTTCACTGGT TAAAGCCAGC GATTACATAG AAAAGATATT ACAAATAGAA ACAGAATGGA TTAGGAAAAA CCCGCAATTA TTAATAAATA ACGCGGATAT AAATGTCGGG CCTCTAGATA TGCTGCAAGC CAAGAAAGGA TTTCTGGGGA AATTACGGCA AATTGTAGTC AGAAAAAGAA AAACGTATTA A
|
Protein sequence | MIDVHSHILP GLDDGSPDLQ TSLAMASAAV ENGIGTIVAT PHFIPGVMEN RRDKVLEAVR ALQSHIDREK LPLSILPGTE AYCDIALPAL VKSGEVLTVN DGGRYLLMEL PMATVPQYTE HVIYELKLLG ITPVIAHPER NKGIASDPSF LYKLVSNGVL AQVNATSLLG EYGESVKAAA LQFLKLRWVH FLATDAHSPG RRLASLVKAS DYIEKILQIE TEWIRKNPQL LINNADINVG PLDMLQAKKG FLGKLRQIVV RKRKTY
|
| |