Gene Dtox_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4109 
Symbol 
ID8431123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4278759 
End bp4279559 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content48% 
IMG OID645036304 
ProductProtein-tyrosine-phosphatase 
Protein accessionYP_003193402 
Protein GI258517180 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4464] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000306575 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAGATG TGCATTCGCA TATTTTGCCG GGCCTGGATG ACGGTTCACC GGACCTGCAG 
ACCTCTCTGG CCATGGCCTC TGCCGCTGTG GAAAACGGTA TCGGTACGAT AGTAGCCACC
CCGCATTTTA TACCGGGTGT TATGGAAAAC AGGAGAGACA AGGTGCTTGA GGCGGTCAGG
GCATTGCAGT CTCACATAGA CAGGGAGAAG CTCCCCCTGA GCATCCTTCC CGGTACTGAG
GCCTACTGTG ATATCGCCCT GCCCGCTCTG GTAAAAAGCG GGGAAGTGCT GACTGTCAAT
GACGGCGGCA GATATTTATT GATGGAGCTT CCCATGGCCA CTGTTCCGCA GTATACGGAA
CATGTAATAT ACGAGTTGAA ACTGCTGGGA ATAACTCCTG TTATTGCTCA TCCCGAACGC
AACAAGGGGA TAGCTTCCGA TCCGTCTTTT TTGTACAAGC TGGTCAGCAA TGGGGTACTG
GCACAGGTAA ATGCCACCAG TCTGCTGGGT GAGTACGGAG AATCGGTAAA AGCTGCCGCC
CTGCAGTTTT TGAAATTAAG GTGGGTTCAT TTTTTAGCCA CTGATGCCCA TTCACCGGGA
AGGAGACTGG CTTCACTGGT TAAAGCCAGC GATTACATAG AAAAGATATT ACAAATAGAA
ACAGAATGGA TTAGGAAAAA CCCGCAATTA TTAATAAATA ACGCGGATAT AAATGTCGGG
CCTCTAGATA TGCTGCAAGC CAAGAAAGGA TTTCTGGGGA AATTACGGCA AATTGTAGTC
AGAAAAAGAA AAACGTATTA A
 
Protein sequence
MIDVHSHILP GLDDGSPDLQ TSLAMASAAV ENGIGTIVAT PHFIPGVMEN RRDKVLEAVR 
ALQSHIDREK LPLSILPGTE AYCDIALPAL VKSGEVLTVN DGGRYLLMEL PMATVPQYTE
HVIYELKLLG ITPVIAHPER NKGIASDPSF LYKLVSNGVL AQVNATSLLG EYGESVKAAA
LQFLKLRWVH FLATDAHSPG RRLASLVKAS DYIEKILQIE TEWIRKNPQL LINNADINVG
PLDMLQAKKG FLGKLRQIVV RKRKTY