Gene Dtox_4104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4104 
Symbol 
ID8431118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4274942 
End bp4275649 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content43% 
IMG OID645036299 
ProductABC transporter related 
Protein accessionYP_003193397 
Protein GI258517175 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0242374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAAAAT TGTTAATTAA TATGGGAAAT GTGAGCATGT CCTACAAAAC CAAATCCGGT 
CCCACAAAAA TATTACATGA TATTAATCTA AATATTTATA AGGATGAGTT TGTAGCTATA
ACCGGCCCAT CCGGTGCCGG CAAAACAACT CTCCTCAACT TAATAGGCCT TCTGGAGAAA
CCTTCCGGCG GCTCCTACCA TTTCATGGGT CAACCTGTTT CCTCATTGTC AGGTTTTAAA
CTTGGCTTAA TACGCAACCG ACATATCGGC TTTGTCTTTC AGGATTTTGA ACTGATTAAC
GATCTCACAA TTTTTAAAAA TGTAGAGCTG CCCCTGATAT ATGGCGGTAT TTCACACCGG
CAAAGAATAC AAAAAGTAAC CAGGGTTTTA ACCAAACTAG GCCTGTCCAA ACACCTGCAT
TACCTGCCTG TACAGCTTTC AGGCGGCCAG CAGCAGAGGG TAGCCCTGGC ACGAGCCATG
GTAACCGAAC CGGCTTTGCT CATATGCGAT GAACCGACGG GCAATTTGGA TTGCCAAACG
GCTGAAGTAA TCTTATCCCT GTTGGAGAAA TTGCACCGGC AGGGGTGCGC CCTGGTTATT
GTAACTCACG ATATGAAAGT GGCAGCAAGG GCCAAACGAA TCATTATTAT GGAAAATGGT
ATGATTATAT CCACAAAAAA TATAATATCA CAAGAGGAAG AAAAATGA
 
Protein sequence
MIKLLINMGN VSMSYKTKSG PTKILHDINL NIYKDEFVAI TGPSGAGKTT LLNLIGLLEK 
PSGGSYHFMG QPVSSLSGFK LGLIRNRHIG FVFQDFELIN DLTIFKNVEL PLIYGGISHR
QRIQKVTRVL TKLGLSKHLH YLPVQLSGGQ QQRVALARAM VTEPALLICD EPTGNLDCQT
AEVILSLLEK LHRQGCALVI VTHDMKVAAR AKRIIIMENG MIISTKNIIS QEEEK