Gene Dtox_4019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4019 
Symbol 
ID8431033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4199955 
End bp4201202 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content48% 
IMG OID645036229 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_003193327 
Protein GI258517105 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CAAAGCCGTA CGAAATCTCC AAGCACGTAG TGCTGGAGGC ATTTCAACGA 
GTGAAAGCAA ATAAGGGGGC AGCCGGAATA GACGACGAAA GTCTGGAAGC ATTTGAAGCA
AACTTGAAGA ACAACCTATA TAAGATTTGG AACAGGATGT CTTCTGGTAG CTATTTTCCC
CCGCCCGTTA AAGCTGTGGA AATACCCAAG AAAACCGGTG GTAAGAGAAT ACTCGGGGTA
CCCACTGTGG CAGACCGGGT AGCACAGATG GTGGCCAAAA TATATTTTGA GCCGCTTGTG
GAGCCACATT TCCACCCGGA CTCTTATGGG TATCGGCCAG GAAAATCAGC AGTTGATGCG
CTAGCTGTTA CCCGGCAGCG ATGCTGGAAG TATGACTGGG TGCTGGAGTT CGATATCAAA
GGTCTGTTCG ATAATATTAA CCATGACTTA TTGATGAAAG CTGTCCGCAA ACATACCGAT
AACCCATGGG TTATACTCTA CATTCAGAGA TGGCTCAAAG CACCTTTTCA AATGCCAGAT
GGCATGCTCA AGGAACGTAC AAAAGGTACT CCGCAGGGAG GCGTCATTAG TCCCGTTCTA
GCTAATTTGT TCCTGCACTA TGCGTATGAT GTATGGATGG CACGGAATCA TCCCGACAAG
CCATTCGCTC GTTATGCCGA TGATAGTGTA GCACACTGCC GCAGCAAGAA AGATGCGGAA
AAACTTCATG ACAGCTTAAA GGAGCGGTTT GCGGAATGTG AGTTAGAACT CCATCCGGAC
AAGACCCGCA TTGTCTATTG CAAAGACGAC GATCGGCGAG GTGAACATCA AGAAACCAAA
TTCGACTTTC TGGGCTACAC CTTCCGGCCG CGCAGGTCTA AGAACAAATA CGGAAAGCAC
TTTGTCAACT TCACCCCGGC AGCTAGTAAT AAAGCGAAAA AGGCTATGCG TCAAACCATT
CATGATTGGC GTGTACATCT GAAACCGGAC AAGGCACTTG AAGACTTATC GCGTATGTTT
AATCCGGTAA TCAGAGGCTG GGTAAACTAT TACGGGCGCT TTTACAAGTC GGAACTGTAT
TCTGTACTCA GGCACATGGA CCGGGCCTTA GTCCGCTGGG TGCAACGAAA GTTTAAGAAA
TTCGCTACTC ACAAACGGCG GGCGACTTAT TGGCTCGGCA AGATTGCCAG GCGTGAACCG
AAGCTGTTCA TACATTGGCA AATGGGGATT TGTCCTGCGG CTGGATAA
 
Protein sequence
MNKTKPYEIS KHVVLEAFQR VKANKGAAGI DDESLEAFEA NLKNNLYKIW NRMSSGSYFP 
PPVKAVEIPK KTGGKRILGV PTVADRVAQM VAKIYFEPLV EPHFHPDSYG YRPGKSAVDA
LAVTRQRCWK YDWVLEFDIK GLFDNINHDL LMKAVRKHTD NPWVILYIQR WLKAPFQMPD
GMLKERTKGT PQGGVISPVL ANLFLHYAYD VWMARNHPDK PFARYADDSV AHCRSKKDAE
KLHDSLKERF AECELELHPD KTRIVYCKDD DRRGEHQETK FDFLGYTFRP RRSKNKYGKH
FVNFTPAASN KAKKAMRQTI HDWRVHLKPD KALEDLSRMF NPVIRGWVNY YGRFYKSELY
SVLRHMDRAL VRWVQRKFKK FATHKRRATY WLGKIARREP KLFIHWQMGI CPAAG