| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3994 |
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| Symbol | |
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| ID | 8431009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 4179783 |
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| End bp | 4181621 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645036211 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003193309 |
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| Protein GI | 258517087 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.460388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGGTA AGGCAAGATT ACTGGTTCTG CTGGGCTGTG ATTTTCTGTT GGTGATTATG
TCTTTGCTCG TTTCACTGCT TATCCGTTTC CCCAGTTGGC CTGAATTAAG CAATGCTCTA
GTTAACTACA TTAATTTTGC CCCGGTTTGT GCGCTTGTTA TGCTTGTCTT TTTTTATTTT
TTTGGCCTTT ATCAAAGAGT ATGGGCCTAT GCCAGCATAG GTGAGTTAGT GACCATAGTA
AAAGCGGTTA CAACAGGAAA ACTTGTTGTC ATTGCTTTGA CCTATTTTAT TTTTACCCCG
TTACCCAGAA GTGTTGTATT AATGTCCTGG GCTTTTAGCA TTATTCTTAT TGGCGGCTCC
AGGTTGTACT GGAGAATATA TATGCAGAAG AAGAAATTTA TCGTGGCCGG CTGCCCGCTG
GATAAAAGGA AAACGCTTAT AGTTGGTGCC GGTGATGCCG GGGTGCTGGT GGTTCGCGAA
CTAATGAACC ATAACAGTGA GTATTTGCCG GTAGGATTTA TTGATGATGA TGCAAGTAAG
CAGGGTATGG TTATCCTGGG CATACCGGTA TTAGGGAAAC GTGAAGAATT GCCGTCGATT
ATCGAAAAAT GCAGAATAAA AGAGGTAATT ATTGCTATGC CGTCAGTGTC TGGACAAGTG
ATAAAGGAAA CTGTCGAGAA GTGTCACAAT TCACGGGTAA AGTTAAAGAT ATTGCCGGGT
GTTTACCAGT TAATCAGCGG GCAAGTGACC GTAAATCATA TTCGCGATAT TCAGGTGGAA
GATTTATTGG GCAGAGAGCC TGTTGAGGTA GATTTAAGCG AGATTGCCGG TTATTTAACG
GACAGGGTGG TTTTGGTTTC CGGTGCCGGC GGTTCGATTG GTTCAGAGCT ATGCAGGCAG
GTGGTCAGGT TGAAGCCTAA GCTTCTGGTT GTTTTAGGGC ATGGTGAGAA CAGTATACAT
AATATAGTTT TTGAACTTCG TGAAATGCAT GGCAGCGATC TGCCTATTGA GATAGTGATT
GCTGATATAA GGGACAGGCA GAAGATTAAT TTGATTTTTA AGAAATATAG GCCGTCAGTG
GTTTTTCATG CTGCTGCGCA TAAGCATGTA CCTCTGATGG AACTGCACCC TGATGAGTCA
GTGAAGACGA ATGTTTTGGG TACAAAGAAT TTAGCAGAAG CAGCCGACAG GGTTGGAACA
GATGTTTTTA TTATGCTTTC AACAGATAAA GCAGTTAATC CTTCCAGTGT TATGGGGGCT
ACCAAGCGTT TGGCTGAGCT GATATTGCAG CAGATGAACA GTATAAGTGA TACTGTTTAT
GCGGCTGTTC GGTTTGGCAA TGTCTTGGGG AGCAATGGCA GTGTAGTGCC TATCTTTAAG
CGGCAGATTG CTCAGGGAGG GCCGGTTACT GTTACTCACC CGGAAATGAA GAGGTACTTT
ATGACTATAC CCGAGGCTGT GCAGTTGGTG ATTCAGGCAG GGGCTATGGC TCAGGGTGGG
GAGATATTTG TGCTGGACAT GGGTGAGCCG GTGAAGATTG TGGATTTAGC TAAATGTATT
ATTGATTTGT CGGGCGTGGA TTGTGAAATT AAATTTACCG GGATTAGGCC GGGGGAGAAG
CTGTTTGAGG AATTGCTGAC GGCAGAAGAG GGTTCTTCTG CTACCCGGCA TAGGAGGATA
TTTGTGGCTA ATGCGGGGAG TGTGGATTTG GAGACATTGG AGTTGGAAGT TTTTCGTTTG
AGAGAGTTGG GAGAGGATGT TGTGACCGGG GATGTTTTTA AAGCATTGAC GGTTCTCCTG
CCAAATATAA AGATATATCG AAAAGATATG GTTGGCTAG
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| Protein sequence | MRGKARLLVL LGCDFLLVIM SLLVSLLIRF PSWPELSNAL VNYINFAPVC ALVMLVFFYF
FGLYQRVWAY ASIGELVTIV KAVTTGKLVV IALTYFIFTP LPRSVVLMSW AFSIILIGGS
RLYWRIYMQK KKFIVAGCPL DKRKTLIVGA GDAGVLVVRE LMNHNSEYLP VGFIDDDASK
QGMVILGIPV LGKREELPSI IEKCRIKEVI IAMPSVSGQV IKETVEKCHN SRVKLKILPG
VYQLISGQVT VNHIRDIQVE DLLGREPVEV DLSEIAGYLT DRVVLVSGAG GSIGSELCRQ
VVRLKPKLLV VLGHGENSIH NIVFELREMH GSDLPIEIVI ADIRDRQKIN LIFKKYRPSV
VFHAAAHKHV PLMELHPDES VKTNVLGTKN LAEAADRVGT DVFIMLSTDK AVNPSSVMGA
TKRLAELILQ QMNSISDTVY AAVRFGNVLG SNGSVVPIFK RQIAQGGPVT VTHPEMKRYF
MTIPEAVQLV IQAGAMAQGG EIFVLDMGEP VKIVDLAKCI IDLSGVDCEI KFTGIRPGEK
LFEELLTAEE GSSATRHRRI FVANAGSVDL ETLELEVFRL RELGEDVVTG DVFKALTVLL
PNIKIYRKDM VG
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