| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3986 |
|---|
| Symbol | |
|---|
| ID | 8431001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 4171769 |
|---|
| End bp | 4174531 |
|---|
| Gene Length | 2763 bp |
|---|
| Protein Length | 920 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 645036204 |
|---|
| Product | S-layer domain protein |
|---|
| Protein accession | YP_003193302 |
|---|
| Protein GI | 258517080 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00445864 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCAATCAA GTAAGAGAGT TTTTATTATT GCGCTTGCTG TATGCTTGTT GCTTGGAGTT
GCAGGCTCCG TGATGGCCGG CGAGTTATCT GATATTAGCG GGCACTGGGC TAATAATCAA
ATTAACAGCT GGTTAAATCA GGGTCTGGTA TTCGGATATC CGGACGGAAC GTTTAAACCG
GATAAAGAAA TGTCCAGAGC CGAATTTGTC GCACTCGTGA ATAGGTCTTT TAAAATTCAA
AATTCAAATG AAACCAACAG TTTTACGGAT GTAAAGACAG GCGATTGGTT CAGTAAGGAT
GTAGAGGCGG CCAGAGTTGC CGGTTATATC TCCGGCTATG AAGACAATAC TTTTAGACCT
GACCGGAATA TCAGCCGCCA GGAAGTTGCC GTGATAGTAA CCAGGCTGCT GAAACTTGAT
ACAGCCGGTG ATTTAACAGA GTTGGACAAG TTCGCTGACA GAAGCAGCAT ACCGTCCTGG
TCGCAGGCCG GACTGAATGC GGCGGTTAAA AACGGCATTA TTAACGGTTA CCCTGATAAA
ACTGTTCAAC CCTTTAAAGC TATAACCAGG GCGGAAGCTA TAGTTTGCTT GAATGCAGCC
ATAGCTAAGG GTTCGACGAC AGTTGAGAAA TCCGGGATAG AAGGAAAAGT AACCTATAAG
GGCAGTGCCG TAAAAGATGC GGCAGTTAAA TTATTTGATA AAGACGGTTT TCAGGTAATA
AAGCAAACCA CAACTGACGC AAAAGGTTTG TATAAACTTG AGGTGGATCC CGGTGTTTAC
GATTTGACGG CTACTACAGA CAAAACTGTG GGCTATGCCA GTGATGTTTC AGCTGCTGCT
GATAAAATTA CCGCTCAGGA TCTTACTTTA GAAGACGGAG CTATAATAAC CGGTAGACTA
AATAATAAAA ACAATAATGC TGCGGCAAAT GTGGAAATAA TGTTTACAAC TAATCCAACC
TTTGTTGCAA CTACAAATTC AAGCGGCCAA TATAAGCTGG TTGTATTGCC TGATCGCCAA
TATGCCGTTA GAGCCATGAA TCCGAGTAAC GGTGAAGTAG AAGTCATTGA TGATAATGTG
ACTGTGGGCA GCGCGGGTCA GACGCAAACC ATGAGTACAA TGAGAGCTTC CTTTGCAACG
ACCTCCTCGG GTGGAGGCGG CGGCGGGGGT GGCGGCGGTT CTTCACAAGC CGTATTAACT
ACCGTAAATG ATATCAATAA AACGACCGTA GAGGTTTCCT TCAACCAGGC GCTAAGCGGT
GTACAAGCTT CTGATTTTAC TTTTAGTCCG AGTTTAAATG TTGTGTCCGC GGTATTTAAA
AATGACGCTA AGCAAGTTGT TGTCTTAACT CTGGCTGAAA GGACATTAGA TACTGATTAC
AAACTGTACT ATAAAGGTAC TGACACGGGT TTTATAATTA AGGTTGTGGG GATTAATATA
ACTGAACCTG TTGGAAGTAC ACCGGTTCCC ATAAACATGG GCAATCATCC GGCTGAAGTT
ACTTTGACCG CTTCTGTTGG AGGGCAGTCA ATACCGTTAG TTATAGATTT GCCTACCTTG
GTGTCACCTA CTGTAGCAAT TAATCCTGTG ACTATTGATC CCGGTTTGAT TCCTGCCGAT
TCCTTGGCGC TGGATATTGT AATTAGCGGT TTAGGTGACA AAGAGGTAAT TCTTACCTTG
CCTGTACCTG CCGGATTGAC TGATCCAGGT GCTTTTCACT GGAACGGTGA GGTGTGGGAC
TACAGAGAAT CCACGATATC AGGTGGAAAA ATAAGCTTTG CCACTAATTT ATCTCCTGTT
ATGATATCAA ATAGAGTTAA AAAGCCGGTG CTCAAAATTG AAAGTGTAAC TCAGAACAGT
GTTGAGATGT CCTGGACAAC TACAGTAGTC AATCCGAAAG GCTTTGATCT TTATAGAGAT
GGTGCAAAAA TAAATGCGGC AATGCTTGAC GGAACTGCTC GTGGTTATAA TGATACAGGA
TTAACCCCGG GTAAGACCTA TGCTTATACT ATTGTGGTAT ATAACGCTCA GAAGTGTCAA
TCACCTAAAG CGGACACTGT GACAGCCACT ACTTTAGCCG ATCAGGGGGA AAACGCCGCT
TTTGACAGCT GGCTAAACAC TATTAAGTCG CAAATTCTTC TTTTAGGCGC GGCGTCAGGC
AATTTGACAA TTGATTTGGG TAGTGCAACT GAGCCGACAA CTGTTACTAT TACCAACGAT
TCATTGAAAA CTAAATCATT AAGTGATTTA CTGATGTCTG TAATAGACAA AATGGTGTCC
AGAAATTATG ATAATGTAGT TATAACATTA CAAGGCAAGA TTACGGAAAT CAATGTTTCA
GGAAAACCTT TAAACGAATA TATAGCTGAT AAGTTAGCCG GAAAACCACA TAGTGCAGCT
GCCATAGAAT ACTTTACGAA ACTGGATGAA GCATCTTTTA ATGCCTTGAA AACGGCACTG
AAAAATGATG CCGCGTCGTA TAACGAGCTT TCGGCTACTG TGCGAGAAGT AATCTCATTT
TCCACGGAGG TTAATATCCC GGCTATGGAA ATCAAAGGAC TGACCTTAAA TAAAGTAACA
TTTGCCAATA ACCATGGCAC AATTGATGTA TTGCCGGGAG ATACAATAAG CATTAATCAA
TTTAAGACTG CATTAGGTAT AAATAGCTCA ATAACACTGG GCAGTTTAAG CGGCTCAGTT
GTTACCCTCG AATTCAAGGG AGCCAGTGGC ACTGTATACG ATTACGAATT TAATCTAAAT
TAA
|
|---|
| Protein sequence | MQSSKRVFII ALAVCLLLGV AGSVMAGELS DISGHWANNQ INSWLNQGLV FGYPDGTFKP
DKEMSRAEFV ALVNRSFKIQ NSNETNSFTD VKTGDWFSKD VEAARVAGYI SGYEDNTFRP
DRNISRQEVA VIVTRLLKLD TAGDLTELDK FADRSSIPSW SQAGLNAAVK NGIINGYPDK
TVQPFKAITR AEAIVCLNAA IAKGSTTVEK SGIEGKVTYK GSAVKDAAVK LFDKDGFQVI
KQTTTDAKGL YKLEVDPGVY DLTATTDKTV GYASDVSAAA DKITAQDLTL EDGAIITGRL
NNKNNNAAAN VEIMFTTNPT FVATTNSSGQ YKLVVLPDRQ YAVRAMNPSN GEVEVIDDNV
TVGSAGQTQT MSTMRASFAT TSSGGGGGGG GGGSSQAVLT TVNDINKTTV EVSFNQALSG
VQASDFTFSP SLNVVSAVFK NDAKQVVVLT LAERTLDTDY KLYYKGTDTG FIIKVVGINI
TEPVGSTPVP INMGNHPAEV TLTASVGGQS IPLVIDLPTL VSPTVAINPV TIDPGLIPAD
SLALDIVISG LGDKEVILTL PVPAGLTDPG AFHWNGEVWD YRESTISGGK ISFATNLSPV
MISNRVKKPV LKIESVTQNS VEMSWTTTVV NPKGFDLYRD GAKINAAMLD GTARGYNDTG
LTPGKTYAYT IVVYNAQKCQ SPKADTVTAT TLADQGENAA FDSWLNTIKS QILLLGAASG
NLTIDLGSAT EPTTVTITND SLKTKSLSDL LMSVIDKMVS RNYDNVVITL QGKITEINVS
GKPLNEYIAD KLAGKPHSAA AIEYFTKLDE ASFNALKTAL KNDAASYNEL SATVREVISF
STEVNIPAME IKGLTLNKVT FANNHGTIDV LPGDTISINQ FKTALGINSS ITLGSLSGSV
VTLEFKGASG TVYDYEFNLN
|
|---|
| |