Gene Dtox_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3986 
Symbol 
ID8431001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4171769 
End bp4174531 
Gene Length2763 bp 
Protein Length920 aa 
Translation table11 
GC content42% 
IMG OID645036204 
ProductS-layer domain protein 
Protein accessionYP_003193302 
Protein GI258517080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00445864 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAATCAA GTAAGAGAGT TTTTATTATT GCGCTTGCTG TATGCTTGTT GCTTGGAGTT 
GCAGGCTCCG TGATGGCCGG CGAGTTATCT GATATTAGCG GGCACTGGGC TAATAATCAA
ATTAACAGCT GGTTAAATCA GGGTCTGGTA TTCGGATATC CGGACGGAAC GTTTAAACCG
GATAAAGAAA TGTCCAGAGC CGAATTTGTC GCACTCGTGA ATAGGTCTTT TAAAATTCAA
AATTCAAATG AAACCAACAG TTTTACGGAT GTAAAGACAG GCGATTGGTT CAGTAAGGAT
GTAGAGGCGG CCAGAGTTGC CGGTTATATC TCCGGCTATG AAGACAATAC TTTTAGACCT
GACCGGAATA TCAGCCGCCA GGAAGTTGCC GTGATAGTAA CCAGGCTGCT GAAACTTGAT
ACAGCCGGTG ATTTAACAGA GTTGGACAAG TTCGCTGACA GAAGCAGCAT ACCGTCCTGG
TCGCAGGCCG GACTGAATGC GGCGGTTAAA AACGGCATTA TTAACGGTTA CCCTGATAAA
ACTGTTCAAC CCTTTAAAGC TATAACCAGG GCGGAAGCTA TAGTTTGCTT GAATGCAGCC
ATAGCTAAGG GTTCGACGAC AGTTGAGAAA TCCGGGATAG AAGGAAAAGT AACCTATAAG
GGCAGTGCCG TAAAAGATGC GGCAGTTAAA TTATTTGATA AAGACGGTTT TCAGGTAATA
AAGCAAACCA CAACTGACGC AAAAGGTTTG TATAAACTTG AGGTGGATCC CGGTGTTTAC
GATTTGACGG CTACTACAGA CAAAACTGTG GGCTATGCCA GTGATGTTTC AGCTGCTGCT
GATAAAATTA CCGCTCAGGA TCTTACTTTA GAAGACGGAG CTATAATAAC CGGTAGACTA
AATAATAAAA ACAATAATGC TGCGGCAAAT GTGGAAATAA TGTTTACAAC TAATCCAACC
TTTGTTGCAA CTACAAATTC AAGCGGCCAA TATAAGCTGG TTGTATTGCC TGATCGCCAA
TATGCCGTTA GAGCCATGAA TCCGAGTAAC GGTGAAGTAG AAGTCATTGA TGATAATGTG
ACTGTGGGCA GCGCGGGTCA GACGCAAACC ATGAGTACAA TGAGAGCTTC CTTTGCAACG
ACCTCCTCGG GTGGAGGCGG CGGCGGGGGT GGCGGCGGTT CTTCACAAGC CGTATTAACT
ACCGTAAATG ATATCAATAA AACGACCGTA GAGGTTTCCT TCAACCAGGC GCTAAGCGGT
GTACAAGCTT CTGATTTTAC TTTTAGTCCG AGTTTAAATG TTGTGTCCGC GGTATTTAAA
AATGACGCTA AGCAAGTTGT TGTCTTAACT CTGGCTGAAA GGACATTAGA TACTGATTAC
AAACTGTACT ATAAAGGTAC TGACACGGGT TTTATAATTA AGGTTGTGGG GATTAATATA
ACTGAACCTG TTGGAAGTAC ACCGGTTCCC ATAAACATGG GCAATCATCC GGCTGAAGTT
ACTTTGACCG CTTCTGTTGG AGGGCAGTCA ATACCGTTAG TTATAGATTT GCCTACCTTG
GTGTCACCTA CTGTAGCAAT TAATCCTGTG ACTATTGATC CCGGTTTGAT TCCTGCCGAT
TCCTTGGCGC TGGATATTGT AATTAGCGGT TTAGGTGACA AAGAGGTAAT TCTTACCTTG
CCTGTACCTG CCGGATTGAC TGATCCAGGT GCTTTTCACT GGAACGGTGA GGTGTGGGAC
TACAGAGAAT CCACGATATC AGGTGGAAAA ATAAGCTTTG CCACTAATTT ATCTCCTGTT
ATGATATCAA ATAGAGTTAA AAAGCCGGTG CTCAAAATTG AAAGTGTAAC TCAGAACAGT
GTTGAGATGT CCTGGACAAC TACAGTAGTC AATCCGAAAG GCTTTGATCT TTATAGAGAT
GGTGCAAAAA TAAATGCGGC AATGCTTGAC GGAACTGCTC GTGGTTATAA TGATACAGGA
TTAACCCCGG GTAAGACCTA TGCTTATACT ATTGTGGTAT ATAACGCTCA GAAGTGTCAA
TCACCTAAAG CGGACACTGT GACAGCCACT ACTTTAGCCG ATCAGGGGGA AAACGCCGCT
TTTGACAGCT GGCTAAACAC TATTAAGTCG CAAATTCTTC TTTTAGGCGC GGCGTCAGGC
AATTTGACAA TTGATTTGGG TAGTGCAACT GAGCCGACAA CTGTTACTAT TACCAACGAT
TCATTGAAAA CTAAATCATT AAGTGATTTA CTGATGTCTG TAATAGACAA AATGGTGTCC
AGAAATTATG ATAATGTAGT TATAACATTA CAAGGCAAGA TTACGGAAAT CAATGTTTCA
GGAAAACCTT TAAACGAATA TATAGCTGAT AAGTTAGCCG GAAAACCACA TAGTGCAGCT
GCCATAGAAT ACTTTACGAA ACTGGATGAA GCATCTTTTA ATGCCTTGAA AACGGCACTG
AAAAATGATG CCGCGTCGTA TAACGAGCTT TCGGCTACTG TGCGAGAAGT AATCTCATTT
TCCACGGAGG TTAATATCCC GGCTATGGAA ATCAAAGGAC TGACCTTAAA TAAAGTAACA
TTTGCCAATA ACCATGGCAC AATTGATGTA TTGCCGGGAG ATACAATAAG CATTAATCAA
TTTAAGACTG CATTAGGTAT AAATAGCTCA ATAACACTGG GCAGTTTAAG CGGCTCAGTT
GTTACCCTCG AATTCAAGGG AGCCAGTGGC ACTGTATACG ATTACGAATT TAATCTAAAT
TAA
 
Protein sequence
MQSSKRVFII ALAVCLLLGV AGSVMAGELS DISGHWANNQ INSWLNQGLV FGYPDGTFKP 
DKEMSRAEFV ALVNRSFKIQ NSNETNSFTD VKTGDWFSKD VEAARVAGYI SGYEDNTFRP
DRNISRQEVA VIVTRLLKLD TAGDLTELDK FADRSSIPSW SQAGLNAAVK NGIINGYPDK
TVQPFKAITR AEAIVCLNAA IAKGSTTVEK SGIEGKVTYK GSAVKDAAVK LFDKDGFQVI
KQTTTDAKGL YKLEVDPGVY DLTATTDKTV GYASDVSAAA DKITAQDLTL EDGAIITGRL
NNKNNNAAAN VEIMFTTNPT FVATTNSSGQ YKLVVLPDRQ YAVRAMNPSN GEVEVIDDNV
TVGSAGQTQT MSTMRASFAT TSSGGGGGGG GGGSSQAVLT TVNDINKTTV EVSFNQALSG
VQASDFTFSP SLNVVSAVFK NDAKQVVVLT LAERTLDTDY KLYYKGTDTG FIIKVVGINI
TEPVGSTPVP INMGNHPAEV TLTASVGGQS IPLVIDLPTL VSPTVAINPV TIDPGLIPAD
SLALDIVISG LGDKEVILTL PVPAGLTDPG AFHWNGEVWD YRESTISGGK ISFATNLSPV
MISNRVKKPV LKIESVTQNS VEMSWTTTVV NPKGFDLYRD GAKINAAMLD GTARGYNDTG
LTPGKTYAYT IVVYNAQKCQ SPKADTVTAT TLADQGENAA FDSWLNTIKS QILLLGAASG
NLTIDLGSAT EPTTVTITND SLKTKSLSDL LMSVIDKMVS RNYDNVVITL QGKITEINVS
GKPLNEYIAD KLAGKPHSAA AIEYFTKLDE ASFNALKTAL KNDAASYNEL SATVREVISF
STEVNIPAME IKGLTLNKVT FANNHGTIDV LPGDTISINQ FKTALGINSS ITLGSLSGSV
VTLEFKGASG TVYDYEFNLN