| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3979 |
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| Symbol | |
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| ID | 8430994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 4164505 |
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| End bp | 4166208 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645036197 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_003193295 |
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| Protein GI | 258517073 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000058301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000371669 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGATGA AGAGAGGCCT AGCCCATATA TTTTATACCT GGCTGGTAAT TGGCTGTGCG
GGATACTTTT TAAAAACTTA TTTTTATAAA ATTAACCAGG ATTTGATTAA TGAATTATTG
ATTATGCTGT TTCTGGGTAT TTTAGCCGAA TGTGTTGCGG TGACTTTTCC TCAGGGGCAG
CTTTCCGCGG GGTTTGCCGT AGTCTTGGCT GCTTTTGTTA TATATGGAGG TCCCACTGCC
GTGTGGATTA GTTTTCTGGC TATACTGGTT GGCCAGGGCA TTGCTAACCG GGGCAACCCG
GTTCGGGCTA TTTTGTTTAA TGCCTCTATG TATGTTTTGG CTGCGGTAGG GTCGGCTGAA
GTTTATAGCT TTCTGGGCGG CAGGCAGGGC GGTTTGAGCT ATGAGAATGC CGCGCCCCTG
TTGGCCTTTA TTTGTACTTT TTTTCTCATT AATAACTTGC TTCTGTATAT CTACCAGCGA
CCTTTCCGGC ACAATCATCT TATTCTAAAT ATGGCTGATA CTCTGCAGTG GGACGGGTTT
ACTTATCTTT TGGCTGTGCC TTTTGGGATA TTGATAGCCT TGTTGTACAA AAATATAGGC
ATCTACGGCT CTTCACTGTT TTTTTTGCCC GTGCTGGTCA TGCAGTTGAT TTTAAGGATA
TATGTTAACC TGGCTCTGGC TAACCGGGAA TTGACGGCAC TGTATGAGGT AGCCCGCCGT
CTGGGCGGCC GGGAGTCTCT GGAGGAAATG CTGGGTATTA TTTTGGCCCA GGCCCGCCGG
GTAATACCTT TTCATACCGG GGTTATCTAT GTTTGGTCCG GGGAAAGAAA GCAGTTTTTG
CCCGGGGCTG TGATTAGTCC CCAGGCAGAA TTGATCAGGC GGCAGGCTTT GGACGGTGGG
GAGGGAATCC TCGGGCAGCT GGCCGAAACA GGCAGGCCGA AAATTATTTT TGAAGGACGG
GCCGGCTATC GTTTGAAGGC TGAGCAAGGC TGGGTGCAGA ACCAGCGCTC CCTGCTGGTC
ATTCCCCTTT TGACAGAAGG TGAGGCGGTG GGTATTATCG CCCTGGGGGA CAAGCGCCAG
AATGCTTTTG ATGAGGGCAA TATGCAGCTG ATGATGATTA TGAGCGGTCA GGTTAAAGTA
GCCATTACTC AAACCTCAAT GCATAAGAGA TTGAAGTCCA TGGCATCCAG GGATCCGCTG
ACCGGGCTTT ATAACCGCAG GTATTTTTTC TTGCTGGCTC AGGCTGAATT TGAACGGGCC
TTGCGGGAAA AGAAAGAATT TGTTTTAATG CTTGTTGATG TGGATAATTT TAATAATATT
AATAACAGGT ACGGTCATGC GGCGGGAGAC GCTGTTTTAT CACAGTTGGG CCAGCTGCTG
TCGAGGTATT CGGAGGAGAA TGCGATTATC GGTCGATGCG AGGGAGAGGA GTTTGCTCTT
GTATTAACCG CGGCAGGTGA GCAGCTCAGC CGACAGGTGG CGGACAGACT CAGGCGGGAG
GTTATGGGTT ATAGCTTTGC TGCGGGGGAG GATAACTTTG TCAGGCTGAC CTTGAGTATA
GGACTGGCTG TGTTTCCCCG TGACGGCGGT GATCTGGGTG ATCTATTTAA AAAAGCCGGG
CAGGCGGTCA AGAAAGCAAA AAAGAACGGT AAAAACAGGA TTGTTGATTT TGCCAAGTTA
GAGGGCTACA AAGATGCTAC GTAA
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| Protein sequence | MKMKRGLAHI FYTWLVIGCA GYFLKTYFYK INQDLINELL IMLFLGILAE CVAVTFPQGQ
LSAGFAVVLA AFVIYGGPTA VWISFLAILV GQGIANRGNP VRAILFNASM YVLAAVGSAE
VYSFLGGRQG GLSYENAAPL LAFICTFFLI NNLLLYIYQR PFRHNHLILN MADTLQWDGF
TYLLAVPFGI LIALLYKNIG IYGSSLFFLP VLVMQLILRI YVNLALANRE LTALYEVARR
LGGRESLEEM LGIILAQARR VIPFHTGVIY VWSGERKQFL PGAVISPQAE LIRRQALDGG
EGILGQLAET GRPKIIFEGR AGYRLKAEQG WVQNQRSLLV IPLLTEGEAV GIIALGDKRQ
NAFDEGNMQL MMIMSGQVKV AITQTSMHKR LKSMASRDPL TGLYNRRYFF LLAQAEFERA
LREKKEFVLM LVDVDNFNNI NNRYGHAAGD AVLSQLGQLL SRYSEENAII GRCEGEEFAL
VLTAAGEQLS RQVADRLRRE VMGYSFAAGE DNFVRLTLSI GLAVFPRDGG DLGDLFKKAG
QAVKKAKKNG KNRIVDFAKL EGYKDAT
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