Gene Dtox_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3976 
Symbol 
ID8430991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4161666 
End bp4163129 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content49% 
IMG OID645036194 
ProductOrn/Lys/Arg decarboxylase major region 
Protein accessionYP_003193292 
Protein GI258517070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000244746 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000155031 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGGGCGAGA CGCAAAAACC CATAATAAAT GCTTTGAAAA AATATATAAA TGATGGGGTT 
ATCAGGTTTC ACATGCCCGG TCATAAAGGA AGAGCGGATA ACACAAGCTG CCTGAAAGGT
TTTCTGGGCG GTAAAGTGCT GGCTGCCGAT GTGACTAATG TTCCCGGCAT GGATGATCTG
CACCAGACAC AGGGCGTGAT TAAAGAATCG CAGTCTATTG CCGCCTCAGT CTATGGGGCG
GATAAAACAT ATTTTTTGAT CAACGGCAGT TCCTGTGGTT TGCAAGCTCT GGTAATAACG
GTTTGCGGCC CGGGGGATAA AATCCTGGTG CCCAGAAATA TGCACAGGTC TATATTAAGC
GGTATTATAT TAAGCGGTGC CGTACCTGTC TTTTATAGCC CGGAATATGA CAGTGACTGG
CAAATCTCTT TGGGTACCGA TCCGGAAATT ATCAGCAATT GCCTCCAAAC GCATCCGGAT
ATCAAGGCTG TTCTGGTAGT CAACCCTACC TACCAAGGCA TCACTTCGGA TATTGCTTCC
ATCGCTGAAA TTGTGCATGC CCGCAATATC CCTTTACTGG TGGATGAGGC ACATGGCCCG
CACTTTATTT TTCATGAAAG ACTGCCGGAA ACTTCTCTGT CTGCCGGTGC TGACGCGGTT
GTACAGGGAA CCCACAAGTT ATTGTCGGCC TTTACCCAGG CTTCCATGCT GCACCTGAAG
GGTAAACGCG TGAACATGGA GAGATTGGAA GCAACTCTGA GACTGCTGCA GAGTACCAGC
ACGTCTTATC TTTTGTTGGC CTCCCTCGAA GCTGCTGTAG CACAAATGGC GCAATACGGC
GGGCAGCTAA TAGAAAAATC GCTGCATCTG TCTCAATTAT TGAGAGACGG AGTTGCTGCC
GTTGACGGGT TGTCTGCCTT TGGTTTTGAG ATAACCGGCA AAAGAGGCGT TTACGGTCTG
GATCAGACCA AGGTGACCGT TTCAGTCAAG CGGCTCAGGC TCACCGGTCT GGCGGCAGAA
AAATTACTGA GGGAAAAACA CAGTATTCAG GTAGAGATGT CCGATATGCG GAACCTGCTT
TTTATCGTAT CCTTTGGCAA CAGTCAGGAA GATATAGAGC GCCTTATTAA TGCTTTAAAA
GACTTGAGCC AGGGTTATGC CGGATTGTCT GCCGGCGGGA AAACAACTGA GCGGGACAGC
TTGATTATAC CGTCAACACC GGAAAGTGTG CTTACTCCCG CGGAAGCCTT TCGCTCCGCT
GTTATAGCGC TGCCCCTTGA GGAGTCTGTG GGACGGGTCT GCAATGAGGT GATTGCCTGT
TACCCGCCCG GTATTCCCGT TATTTGCCCG GGAGAGAGGG TGAGCCGTGA GATAGTGGAT
TACCTGGTTG TAATGAGAAA TCTGGGCATG CATTTTCAAG GCTGTTGCGA TGCTGAGCTA
AAAACTATAC GTGTGGTAAA GTAG
 
Protein sequence
MGETQKPIIN ALKKYINDGV IRFHMPGHKG RADNTSCLKG FLGGKVLAAD VTNVPGMDDL 
HQTQGVIKES QSIAASVYGA DKTYFLINGS SCGLQALVIT VCGPGDKILV PRNMHRSILS
GIILSGAVPV FYSPEYDSDW QISLGTDPEI ISNCLQTHPD IKAVLVVNPT YQGITSDIAS
IAEIVHARNI PLLVDEAHGP HFIFHERLPE TSLSAGADAV VQGTHKLLSA FTQASMLHLK
GKRVNMERLE ATLRLLQSTS TSYLLLASLE AAVAQMAQYG GQLIEKSLHL SQLLRDGVAA
VDGLSAFGFE ITGKRGVYGL DQTKVTVSVK RLRLTGLAAE KLLREKHSIQ VEMSDMRNLL
FIVSFGNSQE DIERLINALK DLSQGYAGLS AGGKTTERDS LIIPSTPESV LTPAEAFRSA
VIALPLEESV GRVCNEVIAC YPPGIPVICP GERVSREIVD YLVVMRNLGM HFQGCCDAEL
KTIRVVK