| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3953 |
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| Symbol | |
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| ID | 8430968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 4133631 |
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| End bp | 4135055 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645036171 |
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| Product | diguanylate cyclase and metal dependent phosphohydrolase |
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| Protein accession | YP_003193269 |
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| Protein GI | 258517047 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000778513 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAACA AAAATACAAA AAAAGGATGT TTTACAAAAC TAAAACAAAG GGAAAAGTTA
AGCCACCATC CCCTGATAAA TATAATTCCG GATTTACTTC TGATAATAAA AAAGGACGGA
ACCATTGTTG ATTTCAAACC CGGCAAAGAT TTTACCGTTT TTATTTCACC GGACAGATGC
CTAGGAAAAA ATATCACTTG CCTTTGGCCG CCTAAATTGG CACAACAAAT TATGGATTAC
CTGGAACAAG CATTTCTGAC CAACGGCATA CAAACCTTCG AATACCATCT TAATATCAAT
GGCATCCAGT GTGTTCAGGA AGCCCGCATG GTAATCAGCG GCGAGGAAGA AGTCTTAATG
ATTGTCCGTG AAATTACCAA ACGCAAGGAA ATGGAACAAA GACTGCGCTA CTTAAGCCTG
CATGACTCGT TGACCGGTCT CTACAACCGG ACTTACTTTG AACAGGAAAT GAAAAGGCTG
TCCGACAAAA AACACGCCCC GGTCGGCATT ATCATCTGTG ATGTGGACGG TCTGAAACTG
ATCAATGACA CTCTGGGCCA TGATAGAGGC GATATATTGA TAGTCAATGC CGCCAACGTA
CTGCGCAGCT CTTTTCGATC AAAGGATGTA ATAGCCAGAA TTGGCGGTGA TGAATTCGCC
ATACTGCTTC CCAACAGCAG TGCTCCGGCA GTGGAAAAAG CTTACCGGCG CATTCATCAC
TCCGTTAATA AATACAATAA AGAAAACCCG CTCATAATGC TAAATATTTC AGTAGGTTAC
GCTGTCAGTA CTGAAGAATC ATCTGACTTA AACCAAATTT TCAAAGAAGC GGATGACAAA
ATGTACCAAA TAAAATTGAG CAGCAAAACC AATACACGCG ACGCCATAAT GCAAACTCTT
CTTAAAAAGC TGCAAATTAA AGAGTGCACC TCTGAAAACC GCATTCAGCG CATGCAGGAT
CTGGTTGAGG TAATGGCCAA TGTCGTAGGA TTAAATCACT CACTGGAAAA ACTGCGCAAT
TTTACACGTT ACCACGATAT CGGAAAGCTC GGTATCTCCG ATAAAATATT ATTTAAACCT
ACAAGCCTAA CCCCGGAGGA ATATTGCCAA ATCAGAAAGC ACTGTGAAAT CGGGCACAGA
ATAGCTCAGT CCAGCCCCGA TCTGATGCTG ATAGCAGACT GGATACTCAA ACACCATGAA
TGGTACAACG GCAGCGGCTA CCCCCTTGGC TTAAAAGGCG AGGAAATACC TTTAGAATGC
CGCATATTCT CCATAGCCGA CGCTTACGAC ACTATGACCA ATAACCAGCC CTACAAGAGA
GCCATGACAC ACGAAGAGGC GCTGGCAGAG CTTCGGAGAT GCGCCGGAAC TCAGTTTGAC
AGAGGAATAG TGGAAATATT TATTCAACTT TTTGATGAAA ATTAA
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| Protein sequence | MKNKNTKKGC FTKLKQREKL SHHPLINIIP DLLLIIKKDG TIVDFKPGKD FTVFISPDRC
LGKNITCLWP PKLAQQIMDY LEQAFLTNGI QTFEYHLNIN GIQCVQEARM VISGEEEVLM
IVREITKRKE MEQRLRYLSL HDSLTGLYNR TYFEQEMKRL SDKKHAPVGI IICDVDGLKL
INDTLGHDRG DILIVNAANV LRSSFRSKDV IARIGGDEFA ILLPNSSAPA VEKAYRRIHH
SVNKYNKENP LIMLNISVGY AVSTEESSDL NQIFKEADDK MYQIKLSSKT NTRDAIMQTL
LKKLQIKECT SENRIQRMQD LVEVMANVVG LNHSLEKLRN FTRYHDIGKL GISDKILFKP
TSLTPEEYCQ IRKHCEIGHR IAQSSPDLML IADWILKHHE WYNGSGYPLG LKGEEIPLEC
RIFSIADAYD TMTNNQPYKR AMTHEEALAE LRRCAGTQFD RGIVEIFIQL FDEN
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