Gene Dtox_3952 details

Gene Information

• Locus tag: Dtox_3952
• Symbol: uvrC
• ID: 8430967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum acetoxidans DSM 771
• Kingdom: Bacteria
• Replicon accession: NC_013216
• Strand: -
• Start bp: 4131563
• End bp: 4133437
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 645036170
• Product: excinuclease ABC subunit C
• Protein accession: YP_003193268
• Protein GI: 258517046
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.00115728
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

TTGCCGGTAA ATGAAAAGCT GCAGTATCTT CCAGCCAAGC CGGGTGTTTA TATTTACCGG 
GATATGGCAG GTGAGATTAT ATATGTTGGA AAAGCCGTGT CCTTAAAAAA CAGAGTTCGT 
TCTTATTTCC AGTCCAGCGC AAATCTGACT CCCAAAGTGC GGGCTATGGT GCCTAAAATA 
GCTGATTTGG AATACATTGT TACCGACTCT GAAGTAGAGG CTTTGATTTT GGAGTCCAAC 
CTGATTAAAG AGCACCGGCC TCGCTACAAT GTTTTTTTAA AAGATGATAA GAGCTATCCC 
TATCTCAAGA TAACCTTAAA TGAGGATTTT CCTAGGGTTT ATATCACCCG CAGGGTTATT 
AAGGACGGGG CGCGCTATTT CGGTCCCTAT ACCAGAGTAG GGGCGGTGCA TGAAACACTG 
CGTCTATTGA AAAAGTTGTT TCCGTTTCGC ACCTGCAAGC AAAAAGAGCC GCCGGTCAGA 
GACCGTCCCT GTCTTAATCA TTATATCAAG CGCTGTCTGG GTCCTTGCTG CGGTTTGACC 
GGCAAACAGG AGTACCGTAA AGCGGTTGAT GAAATATGTC TTTTTTTAGA GGGACGCCAG 
GAGGATCTGG TCAAGCACTT GAAAAAGAGA ATGGAGGAAG CTGCGGAAGC GCTGAGGTTT 
GAGCAGGCTG CTGAACTGCG GGATCAGCTG AGGGCTGTGA ACGAGGTAAT GGAGAAGCAG 
AAAATAGTTT TTGCGGGCCC GGAGGATCGG GATGTGGTGG CCATGGCTCG CGGCATCAGT 
GAAACCTGTG TTATGATTTT CTTTATCCGG GGGGGCAAGC TGACCGGCAG GGAGCATTAT 
TTGCTGCAGG GAACGGAGGA TATGGACAGG CGGGAAGTAG TTACCGCTTT TATCAAGCAG 
TATTATCACC AGGCTGACTT CCTCCCCCGT GAGGTGCTGC TGCCCGGCAT GGTTGAAGAG 
GAAGCAGCGG TAATAAGCCG CTGGCTTTCA GAGAAAAAAG GATCCAGGGT AAACCTTCGT 
GTGCCTAAAA GAGGGGAGAA GCGCGGCCTT TTAGAAATGG CGGAGAAAAA CGCTTTGCTG 
CTGCTGGATC AAATAGAGCA GGAAAAACTG TCCGCCCGGC AGGATAAAGA CAATCTGGAA 
GCGGCCTTAG GTGAACTGGC CGGGGCTTTA GGTCTGGCTA AACCTCCTTA CCGTCTGGAA 
TGTTATGATA TTTCCAACAC CCAGGGTACG GAGACTGTGG CTTCCATGGT GGTGTTTGAA 
GCGGGCAGGC CGCAAAAAGA TCAGTATCGC CGCTTTAAGA TTAAAACAGT TGACGGGCCG 
AATGATTTTG CCTCTATGCA GGAAGTAATC GGCAGGAGGT TTAAGCGCGG GAAAGAAGAA 
AGAGAGTTGA TCAACACGGG GCAGCTCTCC ACAAAAGAGG CCAAGTTTCA TCGCCTGCCT 
GATTGTGTAA TCATTGACGG AGGAAAAGGC CAGCTTTCGG CTGCCAGGTC TGTCATGCAG 
GAGCTTGGCT TTGCTCATAT TCCGGCTTTC GGTCTGGCCA AGCAGGAGGA ACTGCTGTTT 
AAAGAAGGAG AAAAGGAGCC GGTTTTTCTG CCCAGGGATT CTCACGCGCT TTATCTGGTG 
CAGAGGCTGA GGGATGAGGC GCACCGTTTT GCTGTGACTT ACCACAGGCA GCTGCGCTCT 
AAACGCAATC TTAAATCTTT GCTGGATGAG GTTGATGGTA TCGGGCCCAA ACGCCGCCGG 
GAATTGCTCA AGGCTTTTGG CAGTTTGGAG GATATATCGC GGGCCGGCCT GGGAGAGCTG 
TCCGCCGTGG AAGGCATGAA CAAAAAAGCC GCGGAAGCCG TGTATAATTA TTTTCATCAA 
AAAGAAGAGA AGTAG 

 

Protein sequence

MPVNEKLQYL PAKPGVYIYR DMAGEIIYVG KAVSLKNRVR SYFQSSANLT PKVRAMVPKI 
ADLEYIVTDS EVEALILESN LIKEHRPRYN VFLKDDKSYP YLKITLNEDF PRVYITRRVI 
KDGARYFGPY TRVGAVHETL RLLKKLFPFR TCKQKEPPVR DRPCLNHYIK RCLGPCCGLT 
GKQEYRKAVD EICLFLEGRQ EDLVKHLKKR MEEAAEALRF EQAAELRDQL RAVNEVMEKQ 
KIVFAGPEDR DVVAMARGIS ETCVMIFFIR GGKLTGREHY LLQGTEDMDR REVVTAFIKQ 
YYHQADFLPR EVLLPGMVEE EAAVISRWLS EKKGSRVNLR VPKRGEKRGL LEMAEKNALL 
LLDQIEQEKL SARQDKDNLE AALGELAGAL GLAKPPYRLE CYDISNTQGT ETVASMVVFE 
AGRPQKDQYR RFKIKTVDGP NDFASMQEVI GRRFKRGKEE RELINTGQLS TKEAKFHRLP 
DCVIIDGGKG QLSAARSVMQ ELGFAHIPAF GLAKQEELLF KEGEKEPVFL PRDSHALYLV 
QRLRDEAHRF AVTYHRQLRS KRNLKSLLDE VDGIGPKRRR ELLKAFGSLE DISRAGLGEL 
SAVEGMNKKA AEAVYNYFHQ KEEK