Gene Dtox_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3939 
Symbol 
ID8430954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4114652 
End bp4115599 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content46% 
IMG OID645036157 
Productprotein of unknown function DUF199 
Protein accessionYP_003193255 
Protein GI258517033 
COG category[S] Function unknown 
COG ID[COG1481] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00647] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000093648 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.595989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTT CGGTAGTGAC CAAGGATGAA CTTGCCCGCA TAATTGCTAA AAAGGATTGC 
TGCAGGTTAG CGGAACTGGC AGCCCTGGTG AAAATGGACG GCAGTATAGA AATAAGCGGC
AACCAGAGAC TGGGTTTAAG TGTAGTGACA GAGAGTGCCG GAGTGGCGCG CAAAATACTA
ACGCTGATTA AGCAGTTTTT TGATCATAAT ACCCAGGTAA TAGTACGGCG CAAGGCCAGA
CTGAAGAAGA ATAATATTTA CCAGGTAAAG GTCAGCTCGG CTCCCGGTAT AAGAGATATT
CTGGTTCGTT TGGGTATGCT GGATGAGGAC GGACAGCTGA GTGAGAAAAT AAAAGCCGGG
TTAATTACAC GTACCTGCTG TAAAAAAGCG TACCTGAGAG GCGCTTTTTT AGGAGGTGGC
TCGGTAAATA ATCCCGAGGG AGATTATCAC CTGGAGATTA TCACTAACAA AGAACAGCAT
GCTCTGGATA TAGCCGGTGT AATGCGTAAA TTCGACCTTT CGGCCAAAGT CAGTACCAGA
AAGAACTGGT ATGTAGTATA CTTAAAGGAA AGTGAGCAGA TAATTACCTG CCTTAATGTT
ATGGGCGCTC ACACAGCCTT GTTGGATTTT GAAAACGCGC GTATATACAA AGACATGCGC
AATCAGGTAA ACCGGCTGGT GAATTGTGAG ACAGCCAACT TAAACAAAAC TGTTGACGCA
GCGGTTCGCC AGTTAGAGTG CATTAAACTG ATTGAAGGTC TTGTCGGGTT GGAGAAACTG
CCGAAAAGCC TGCGCAGGAC AGCGGAACTG AGGCTGCAAA ACCCAGAGGT AAGTCTGAGA
GAGCTGGGAG ATTTATTGGA GCCTAAAGCG GGAAAATCTT GCGTTAACCA CCGTATGCGT
AAATTAGAGA AGATAGCCGA CGCATTGCGG GCTAAGCGGC AGTATTAG
 
Protein sequence
MSFSVVTKDE LARIIAKKDC CRLAELAALV KMDGSIEISG NQRLGLSVVT ESAGVARKIL 
TLIKQFFDHN TQVIVRRKAR LKKNNIYQVK VSSAPGIRDI LVRLGMLDED GQLSEKIKAG
LITRTCCKKA YLRGAFLGGG SVNNPEGDYH LEIITNKEQH ALDIAGVMRK FDLSAKVSTR
KNWYVVYLKE SEQIITCLNV MGAHTALLDF ENARIYKDMR NQVNRLVNCE TANLNKTVDA
AVRQLECIKL IEGLVGLEKL PKSLRRTAEL RLQNPEVSLR ELGDLLEPKA GKSCVNHRMR
KLEKIADALR AKRQY