| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3936 |
|---|
| Symbol | |
|---|
| ID | 8430951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 4110595 |
|---|
| End bp | 4111779 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645036154 |
|---|
| Product | Phosphoglycerate kinase |
|---|
| Protein accession | YP_003193252 |
|---|
| Protein GI | 258517030 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00101338 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.765771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAA AATCAGTTAA GGATATAGAT GTTCGCGGAA AAAGGGTTTT TGTACGGGTT
GATTTTAATG TTCCGTTAGA TGAAAAGCAT GAGGTTACTG ACGATACCAG AATCCGGGCG
GCACTGCCGA CTATTCGGTA TCTCACGGAA CAAAAGGCTA AAGTTATTTT AGCCTCTCAT
TTGGGCAGGC CTAAAGGAAA AGTTGCAGAG GAATTCCGTC TTGATCCGGT GGTCCGTCAC
TTGGAGGAGT TGCTGGGGAA GAAAGTTATT AAGACCGATG ATTGTATAGG TGAAGAAGTT
AAGGCAGCCA TATCTGAGAT GCAGGAAGGT GATATCCTGC TGTTGGAAAA CTTGAGGTTT
TACCCGGGTG AAGAAAAGGA TGACCCGGTA TTCGCACGTG AACTGGCTGC TTTGGCCGAT
GTCTATGTGA ATGATGCTTT CGGCACGGCT CACCGGGCTC ACGCTTCTAC ACATGGTATA
GCCAGGTTAT TGCCGGCTGT AGCGGGGTTT TTGCTGCAAA AAGAGATAAA AATGCTGGGA
TCTGCTATCA ACAACCCGCA GCGTCCTTTT ACCGCTATTT TAGGCGGGGC CAAGGTTTCG
GACAAGATAG GAATTATTAA AAACTTGCTG GGCAAAGTAG ATAACCTGCT GCTGGGCGGG
GGTATGGCCA ATACTTTTAT CAAGGCGCAG GGTTATGATG TAGGCAAATC CCTTTTGGAA
TCAGATAAGG TGGAACTTGC CGGAGAGCTG ATAAATGAGG CCAGGGTTAA AGGGATTAAT
TTTTTATTGC CGGTTGATGT TGTGGTGGCT CCTATGCTTT CCCCTGATGC AATGACTCAA
GTGGTGGAAA TCAGCCATAT TCCCGGTGAT AATATGGCTT TGGATATAGG GCCTGAGAGT
ATAAAAAAAT ATTCGGAGAT TATTAAGAGC AGCAAGACGG TAATCTGGAA CGGTCCGATG
GGTGTTTTTG AGATGAACGC GTTTGCTAAC GGCACTAATG ATTTAGTACG GGTTCTGGCT
GATTCCGGTG CTGTAACTAT AGTAGGCGGG GGCGATCTGG ATGCCGCCGT TGAAAAGACA
GGTCTAAGCG ATAAAATAAC CCATGTTTCT ACGGGAGGCG GCGCTTCACT GGAGTTTCTC
GAAGGTAAGG AATTGCCCGG TATTGCTGTT TTGCAAGACA ATTAG
|
|---|
| Protein sequence | MPKKSVKDID VRGKRVFVRV DFNVPLDEKH EVTDDTRIRA ALPTIRYLTE QKAKVILASH
LGRPKGKVAE EFRLDPVVRH LEELLGKKVI KTDDCIGEEV KAAISEMQEG DILLLENLRF
YPGEEKDDPV FARELAALAD VYVNDAFGTA HRAHASTHGI ARLLPAVAGF LLQKEIKMLG
SAINNPQRPF TAILGGAKVS DKIGIIKNLL GKVDNLLLGG GMANTFIKAQ GYDVGKSLLE
SDKVELAGEL INEARVKGIN FLLPVDVVVA PMLSPDAMTQ VVEISHIPGD NMALDIGPES
IKKYSEIIKS SKTVIWNGPM GVFEMNAFAN GTNDLVRVLA DSGAVTIVGG GDLDAAVEKT
GLSDKITHVS TGGGASLEFL EGKELPGIAV LQDN
|
|---|
| |