Gene Dtox_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3828 
Symbol 
ID8430842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4011929 
End bp4012984 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content48% 
IMG OID645036056 
Productribosome-associated GTPase 
Protein accessionYP_003193155 
Protein GI258516933 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTTAG AAAATATAGG ATGGAACTCA TTTTTCAATA ACAGCTTTGC TCCTTATTCA 
CAGCAGGGCT ATATTGCCGG CAGAATAGCG GCAGAGCACA AACATATCTA CCGCGTATAC
ATTGAGCAAG GTGAATTGCT GGCCGCCGTC TCCGGCAAAA TGCGCTACGA AGCCTCCGGC
CGGCGGGACT TTCCTGCTGT CGGAGACTGG GTTGTTCTTA ACCCAACCGG GGAAGGAAAA
GCCACTATAC AGGCTGTTTT ACCCAGACAA AGCAAGTTTT CCCGGCAAAC AGCGGGAACA
ACTGTTGAAG AACAGGTAAT AGCGGCTAAC ATAGATACCG TGTTTTTAGT TGCTGCCCTG
AATAATGATT TTAATTTAAG GCGTTTGGAA CGCTACCTGA CACTGGCCTG GGAAAGCGGA
GCTAATCCGG TTATAATTTT GAGCAAAGCG GACTTATGCA ATGATATAAA TCAAAAAGTC
CTGGCCATTG AAAACATTGC TCCGGGCGTG CCGGTACATG TGACCAGCAG CCAAAGCGGA
ACAGGGATAA CTGAACTGGC TTCTCATCTA AGAAAGGGCC GCACTGCGGC CCTGCTGGGC
TCCTCAGGAG CGGGCAAATC AACACTTATC AACCATCTTT GCGGCAGAGA AGCACAAAAA
ACCGCCGAAA TACGACAGTC AGATGACCGG GGCAGGCATA CCACAACCTA CCGCGAATTA
ATCATTCTAC CCGGGGGTGG ACTTATAATA GATACACCGG GGATGAGAGA ATTGCAGCTA
TGGGGTACGT GTGAAGGATT GCAATCATTT GCAGATATTT CGTTACTGGC CTCACAGTGC
CGCTTTAAGG ACTGCCGGCA TGAAGGAGAA CCCGGCTGTG CTGTGAAAGC CGCTCTAGAG
AATGGCCGAC TGGATTATGA CAGGTACGGG AATTACCGCA AACTGCAAAA AGAACTGGCC
TACCTATCCA GGAAAGAAAA CCGGCAGGAG TATCTGGCAG AGAAAGAAAG ATGGAAAAAG
ATTCATAAAC AGATAAAAAA TCTTAAAAAA CGATAG
 
Protein sequence
MNLENIGWNS FFNNSFAPYS QQGYIAGRIA AEHKHIYRVY IEQGELLAAV SGKMRYEASG 
RRDFPAVGDW VVLNPTGEGK ATIQAVLPRQ SKFSRQTAGT TVEEQVIAAN IDTVFLVAAL
NNDFNLRRLE RYLTLAWESG ANPVIILSKA DLCNDINQKV LAIENIAPGV PVHVTSSQSG
TGITELASHL RKGRTAALLG SSGAGKSTLI NHLCGREAQK TAEIRQSDDR GRHTTTYREL
IILPGGGLII DTPGMRELQL WGTCEGLQSF ADISLLASQC RFKDCRHEGE PGCAVKAALE
NGRLDYDRYG NYRKLQKELA YLSRKENRQE YLAEKERWKK IHKQIKNLKK R