Gene Dtox_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3826 
Symbol 
ID8430840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4008866 
End bp4010968 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content44% 
IMG OID645036054 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003193153 
Protein GI258516931 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACGCT TATTGCAAAT AATATTTAAG CTGTTATTCA GGCTTCGCCT GGTTAATTTT 
GAGAATTTGC AATTTAACGG GCCGTCTGTA ATTATACCTA ATCATGTGTC CTTTATAGAT
CCTGTTATTC TATATCTTTT TCTGCCGCGG GAAGTAGTCT TTGTGGTAAA CACTCACATT
GCCAAACGTT TTGCTTTTGT CTTGCGCTTT TGCCATCATG TTGATGTGGA TCCGTTAAAT
CCTTATTCCT TAAAAAAAAT AGCTGCCATT GTTAAAACCG GTACCCCGGT GGTATTGTTT
CCGGAAGGAC GGATTACAGT AACCGGAGGC TTAATGAAAG TATATGACGG TATAGGTTTT
ATTGCTCAAA AAACGGGAGC TGCTCTTTAT CCCCTTATTT TTACCGGTTT AGAGTATTCT
AAATCATCCC GGGTGCGGGA TAAGCTTAAG AGCAGGTGGT TCCCGAGGGT GCGGCTTTTT
GCGGATCAGC CGGTAAAATT GAAGGCTGAT GAAACTAAAA CTTCTAGAAT GCAGAAAAGG
GAACTGAGCA ATAAAATTCT GCAAACTATG CAGCAGTCTC TTTTCAGGGC TAAATATGAG
GAAAAGGTTA ATCTTTTTAA TAATTTGCTC CAAGCCGCCC AGACCAATGG GACTGGGAGC
ATTATTGCAG AGGACATGGG GCAGAAAATA TCCTATCGCA ATTTGCTTAT CGGATCCTAT
GTTTTGGCTA AAAAATTGTC CGGATTGCTG AAAGATGAGA ATATAGGGGT TTTACTGCCT
AATTCCATAG GCCATGTGGT AACCCTTTTT TCCCTGTTTT TCAACGGTAA GACTCCCGCT
GTGCTTAACT TTTCCGCAGG GGTGAAAAAT AACCTGGACT GCGCTGAAAC AGCCGGTATC
GGTGTAGTTT TGACTTCCCG TGTGTTTATA GAAAAGGGTG ACCTGAATGA TTTAGCGGAG
GCACTGGCTA AAAAATATAA CGTTATCTAT TTGGAGGATA TTAAAAAACA AATAGGTTTT
AGCGATAAAT TGAACGGTTT AATTAAATAT TTAGTCAAAG CTAAAGCCCA AAAGCCCACT
GGCAGAGTAA TACTTTTTAC CTCGGGAAGT GAAAGCAAGC CCAAGGGTGT GGTGTTAAGC
CACAGTAATA TTGCGGCCAA CATCAGACAG GTTTCCTGCG TTATTGATTT TACGCCTAAG
GATAGGATAT TCAATGCCTT ACCTATGTTT CACAGCTTTG GCCTGACAGC CGGCACCATG
CTGCCCCTGC TCTCCGGTGT AGAAGTGTTT CTCTATCCCA GCCCTTTGCA TTATAAAATT
ATACCCGAGC TTTGTTATGA GAAAAGAGCC ACGGTTATTT TCGGCACTTC CACTTTTTTG
GCCTCGTATG GAAAATATGC TCATCCCTAT GACTTTTTTA GCTTGAGGCT TGTCTTAGCC
GGGGCAGAAA AACTTAAAGA AGATACCAGG GCCCTTTGGC AGGATAAGTT TGGTATCCGT
ATTTTAGAAG GCTATGGTAC TACGGAAACA GCACCGGTTT TGAGTTTGAA TACGCCGCTT
TTTTATAAAG AAGGCACGGT AGGCAGGTTG CTGCCGGGAG TAAGTTGGCA ATTGGAAATT
GTTGAGGGGA TTGAAGGAGG GGGGAGTCTT CTGGTGCAAG GGCCAAATGT AATGGAGGGC
TACCTGCTGC ACGGGGTTGG TTTTGTTCCC GCCCCGGTCT GGTATAACTG CGGCGACGTT
GTAAGTATTG ACCGGGAGGG GTTTGTTGCT GTCAAGTCCC GGCTGAAGAG GTTTGCCAAG
GTCTCAGGTG AAATGGTAAG TTTAAATCTG GTGGAAGAGC TGGCTGAAAA GTGTTTTGGA
ATTGCTGGGC AAGCAGCTGT GAATATGCCT GATTCCAGAA AAGGGGAAAA AATCATACTC
TATACCTCTG ACAAGAAAGC GACTAGGCAG CAGCTCAGAG ATTATCTGGC GCGCAGTCAC
CAGAGTATGC TGCTGATGCC GGCGGAGGTG GAGTATATTG AAAAACTGCC TCTGCTGGGC
AGCGGTAAGA CAGATTATGT AGCATTAAAA CAAGTTGCTG AAAAAAGAAA CTTGAAGGAC
TAA
 
Protein sequence
MRRLLQIIFK LLFRLRLVNF ENLQFNGPSV IIPNHVSFID PVILYLFLPR EVVFVVNTHI 
AKRFAFVLRF CHHVDVDPLN PYSLKKIAAI VKTGTPVVLF PEGRITVTGG LMKVYDGIGF
IAQKTGAALY PLIFTGLEYS KSSRVRDKLK SRWFPRVRLF ADQPVKLKAD ETKTSRMQKR
ELSNKILQTM QQSLFRAKYE EKVNLFNNLL QAAQTNGTGS IIAEDMGQKI SYRNLLIGSY
VLAKKLSGLL KDENIGVLLP NSIGHVVTLF SLFFNGKTPA VLNFSAGVKN NLDCAETAGI
GVVLTSRVFI EKGDLNDLAE ALAKKYNVIY LEDIKKQIGF SDKLNGLIKY LVKAKAQKPT
GRVILFTSGS ESKPKGVVLS HSNIAANIRQ VSCVIDFTPK DRIFNALPMF HSFGLTAGTM
LPLLSGVEVF LYPSPLHYKI IPELCYEKRA TVIFGTSTFL ASYGKYAHPY DFFSLRLVLA
GAEKLKEDTR ALWQDKFGIR ILEGYGTTET APVLSLNTPL FYKEGTVGRL LPGVSWQLEI
VEGIEGGGSL LVQGPNVMEG YLLHGVGFVP APVWYNCGDV VSIDREGFVA VKSRLKRFAK
VSGEMVSLNL VEELAEKCFG IAGQAAVNMP DSRKGEKIIL YTSDKKATRQ QLRDYLARSH
QSMLLMPAEV EYIEKLPLLG SGKTDYVALK QVAEKRNLKD