Gene Dtox_3821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3821 
Symbol 
ID8430835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4002568 
End bp4003449 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content48% 
IMG OID645036049 
Productinner-membrane translocator 
Protein accessionYP_003193148 
Protein GI258516926 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000974122 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACTC ATGAACAGCT TTTACAATTC ATCTTTTCCG GCTTGATGCT CGGCAGTATT 
TACGCACTGA TTGCCCTGGC CCTGGTTACT ACTCATAATA TAACCGGTAT TTTAAATATG
GCCCAGGGCG AGTTCGTCGC TATCGGTGCC TTGACCGCCT GTAGTTTTTA CGAGGCGGGT
TTTTCCTTGC CCGCAGCTTT TATTCTGGCT GTATTGATTA CGGCGATTGT AGGCGGTTTT
ATGGAGAGGC TGGCCATCAA CCCGGCCCGC AATTCATCGC CCCTGTCTCT GATTATCATA
ACTATAGGTG TATCTATTGC TTTGCGCGGT ACAGCACTTC TTATATGGGG TACAGATCCT
TATTCTCTGC CTTCGTTCAG CGGGGGCGAA TCACTGCATG TGCTGGGAGC CGTAATTAAT
GAACAAGGCA TATGGATTTT GGGTTTGGTC ATATTTGCGG TATCAGGCTT GTATATTTTT
ATGGAAAAAA CTTACTGGGG CAAGGCGGTC CGGGCCTGTG TGATTAACCG CGTAGGCGCC
AGGTTGGTAG GCATAAACCC GTATATCCTT TCCTTTATGG CCTTTGTGGC CAGTGGGGCA
TTAGGAGCGG CAGCCGGCAT TGTGATTACT CCTGTTACTC TTGCTACTTA TGATATGGGT
TTTGTGCTCG GTTTGAAAGG CTTTGTTGCG GCAGTGTTGG GCGGTATCAA CAGTGTCGGA
GGGGCAATTC TGGGGGGTCT TTTATTGGGT GTTTTGGAAA TGTTCGGAGC AGGTCTAGTC
TCATCCGGTT TTAAGGATGC TGTTGCCCTG ATTGTTTTAA TCATAGTTTT GCTGGTCAGA
CCGGAAGGCA TTATCAGTGC AGTTACCGGT AGAAGAGTAT AA
 
Protein sequence
MQTHEQLLQF IFSGLMLGSI YALIALALVT THNITGILNM AQGEFVAIGA LTACSFYEAG 
FSLPAAFILA VLITAIVGGF MERLAINPAR NSSPLSLIII TIGVSIALRG TALLIWGTDP
YSLPSFSGGE SLHVLGAVIN EQGIWILGLV IFAVSGLYIF MEKTYWGKAV RACVINRVGA
RLVGINPYIL SFMAFVASGA LGAAAGIVIT PVTLATYDMG FVLGLKGFVA AVLGGINSVG
GAILGGLLLG VLEMFGAGLV SSGFKDAVAL IVLIIVLLVR PEGIISAVTG RRV