Gene Dtox_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3758 
Symbol 
ID8430768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3922621 
End bp3927186 
Gene Length4566 bp 
Protein Length1521 aa 
Translation table11 
GC content44% 
IMG OID645035985 
ProductGlutamate synthase (ferredoxin) 
Protein accessionYP_003193088 
Protein GI258516866 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00101986 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA GTTATGGTCT GCCAAGAAGA CAAGGTCTGT ATGATCCGGC CTTCGAACAT 
GATGCCTGCG GTATGGGGTT CGTTGTGAAT ATCAATGGCG AAAGATCTCA TGATATAATC
GATCAAGCCT TAACCGTACT GGAAAACTTA AGCCACAGAG GCGCAAGTGG AGCTGACGAA
AATACAGGAG ATGGTGCCGG AATACTGATT CAGATCCCTC ACGATTTCTT TAAACGGGAA
AGTGAAGTTA TCGGTTTTGA TTTACCCGAA CAAGGAAGCT ACGGCGTAGG GATGATATTT
GCCCATAAGT ATGATGATTT TCGGAAAACT CAGATGGAAA CCTTTGAAAA AATTGTCCGG
GAGGAAGGTC AAAAAATCCT GGGCTGGAGG GAAGTTCCTG TCGATAAAGC GATTATTGGG
GAAAGCGCAA AAGCAGTAAT GCCCCGTTTT GTTCAGGTTT TTATCAGCAA GGATGCCGGT
ATCAAAGACG AGATGGATTT TGAAAGAAAG CTTTATACCA TTAGAAAACG TGCAGAAAAA
GTTATAGTAC CGATGTGTGA AGATAAGGGC GGGGCTTTCT ATATAGCCAG CCTTTCCTCA
AAAACCATTG TTTATAAAGG CATGCTGACT GCAGAACAAC TTCGGAACTT TTATCTTGAT
CTTGCCGATC TTGATTTTGT ATCAGCTCTG GCTATGATCC ATTCGAGGTT TAGCACCAAC
ACCTTTCCCA GTTGGGAGAG AGCACATCCC AATCGATACC TCGTTCATAA TGGTGAAATT
AATACTATCA GAGGTAATGT CAACTGGATG AAAGCCAGAC AGAAATGTAT TGATTCACCG
CTTTTTGATG ATATTTCGAA AGTCTATCCC ATTGTCGACG AGACAGGCAG TGATTCTGCA
ATGTTCGACA ATAGCCTGGA ATTCCTTCAT CTCACAGGAA GGTCTCTTCC TCATGCTGTG
ATGATGATGA TCCCGGAACC CTGGGAAAGA AATGAGCTCA TGTCCCAGGA GAAGAAGGAT
TTCTATAAAT TCCATGATTT TCTTATGGAG CCCTGGGATG GCCCTGCGGC TATGGCTTTT
ACTGACGGTG TAGTTATCGG TGGAGTACTG GACAGAAACG GGCTCCGGCC TTCCCGGTAT
TATGTTACCA AAGATGACAG GGTGGTCATG GCTTCGGAAG TCGGGGTCAT GGATATCAAG
CCTGAAAATG TAAAGTATAA AGGACGGCTG GAACCAGGCA GGATGCTGCT TATTGATACA
GAGCAGAAGA GAATCATCTC TGATGAAGAA CTCAAGAGAA GTGTTTCGAT GTCACAGCCC
TATGTTGAAT GGAATAGTCG TCATATCATT CCCTTATGCA ATATTCCCGT TGAAAAAGTG
AAGGAAGAGA GCGTAAAGGG GGAGCTGGTT AAGCGGCAAA AAGCTTTTGG TTATACGTAT
GAAGATATTA AGTCAATTAT TCAGCCTATG GCCGTCACGG GTGTAGATCC TGTTGGAGCA
ATGGGTATGG ATTCTCCTTT GGCTGTATTA TCGGAGAAAC CTCAAATGCT GTATCTTTAC
TTTAAACAGC TTTTTGCACA GGTTACCAAT CCTCCTATTG ATGGAATAAG AGAGGAAATC
ATAACTTCCA GCAGTATCCT CCTTGGGAAC AGTGGAAACC TGCTCGATCC CGATCGGGAA
AATACGGCCA GTATAGCCTT GGAGCATCCG ATATTAACTA ATGAACAGCT TAATACGATT
AAGCAGCTAA ACAATGACAA GTTTAAGGCA GCGACGATTT CCATCCTTTA TAATATGTCA
AAAGGGGCAA GAGCAATGGA ACGAGCCCTG GACAGGATTT TTAAAGAGGC GGATAAGGCA
ATCAGGGAAG GGGCTAATAT CATTATTCTT TCGGACAGAG GCGTTAATGA GAGTCTCGCA
CCGATCCCGG CACTTTTAGC CTCATCCGGA TTGCACCAGC ACCTGATTAG AAAAGAGATC
AGAACAAATG TCGGCATAGT TTTGGAATCC GGAGAGCCAA GGGAAGTACA CCATTTCTGT
ACGCTTATCG GTTATGGGGT CACGGCAATC AATCCGTATT TAGCCTACGA AACAATTAAG
GAGCTTGCTG AAAAAGGGTT ACTTGAAGGT AAGACTTACG AAGATGGCAT AAAGAACTTT
ATTAAGGCTT CCGTTAAAGG TATGCTTAAA GTGCTCACCA AAATGGGTAT TTCAACAATC
AAAAGCTATC ACGGAGCTCA GATTTTTGAG GCAGTGGGTC TTAGAAAAGA TCTGATTGAC
AGGTATTTTA CTTTCACACC TTCGAGAGTC GAGGGGATAG GGCTTGAAGA AATCGCCACG
GAAAACCAGC TGCGGCATGA GAGTGCCTAT CTGGAAAATT CACCTTATGC GGGTACCCTT
GAAGTAGGAG GTTATTTTCA GTGTAAGGAT GATGGGGAAG TCCATATGTA CAATCCCGAA
ACTATTTACC AGCTTCAGAG GGCATGCCGG GAAGGAGATT ACTCTCTATA TAAAGATTTC
TCCAGGAAGA TAAACGATGA AGAGATATAC ACTTTAAGGA ATCTTCTTGA TTTCAAGTAT
GATACAGGTG ATACTATTCC CATTGAGGAA GTGGAACCGG TTGAGGCAAT TGTCAGAAGG
TTTAAGACCG GAGCTATGTC CTACGGCTCT ATCAGCAAGG AGGCTCACGA ATGTCTGGCT
ATCGCTATGA ACAGGCTGGG CGGAAAGAGC AACACCGGTG AAGGTGGAGA GGACATCGAA
AGGTTCAAGG TTATGGACAA TGGGGACTCT AAAAAAAGTG CTATTAAACA AGTTGCCTCA
GGGCGTTTCG GTGTGACCAG CAATTATTTA GTGAATTCTC AAGAAATACA AATAAAAATG
GCTCAGGGGG CAAAACCAGG TGAAGGCGGC CAACTTCCGG GACGCAAGGT TTACCCGGCA
ATTGCCAGGG TTAGGCACTC AACTCCGGGT GTGGATCTTA TTTCGCCGCC GCCGCATCAT
GATATCTATT CCATTGAAGA TTTGGCTGAG CTTATCCACG ATTTGAAGAA TGCCAACAAG
GATGCCCTGA TTAACGTTAA ACTTGTTTCT GAGGTTGGGG TTGGCACAAT CGCTGCCGGG
GTAGCGAAAG GAAAAGCTGA TGTAATCCTG ATTAGCGGTT ATGATGGCGG AACCGGAGCC
TCTCCACGGA CTAGTATCAG GAATGCGGGA CTTCCGTGGG AATTGGGACT TGCCGAGACT
CACCAGACTT TAGTTCTCAA CAAGCTAAGG GACAGGGTTG TTTTGGAAAC AGACGGAAAG
ATGCTCTCGG GAAGAGATGT TATTATTGCA GCAATGCTTG GGGCGGAAGA ATACGGTTTT
GCCACAACAC CTCTTATTGC CTTGGGATGT GTAATGATGA GAGTTTGCAA CCTCAACACA
TGTCCGGTGG GCATAGCCAC TCAGAATGAA AAATTAAGAA AGAATTTCAC GGGCAAACCC
GAGCATGTTG AAAACTACAT GCGTTTTGTC GCTCAGGAAA TGCGTGAAAT CATGGCTAAA
CTAGGCTTTA GAACAATCGA TGAAATGGTT GGACGGACAG ACAAATTGAA ACATAAGGAG
AATACCAAGC ATTGGAAGGC AGCTACGGTA GATCTGTCTC GGGTGCTCTA TCAACCTTAT
GCCGGTGCTG ATGTCGGTCG GTTCCATAGC CAGGCACAGA ATCATGGGCT GGATAAATCA
CTGGATATGA AGAGGCTGCT CAGGATGTGT AAGCCGGCGC TGGAGAATGG TAAATCCATT
AGGGCTAAAA TAAAGATTAA TAATACTGAC CGGGTAGTCG GAACGATTAT CGGAAGCGAA
ATCTCTAAGA GATACGGTGA AAACGGGCTT CCTGAGGATA CTATCAAGCT CACCTTTGTG
GGTTCTGCCG GACAGAGCTT TGGAGCATTT ATTCCCAAAG GGATGTCTCT AGAACTGGAA
GGTGATGCCA ACGATTATTT GGGAAAAGGC TTATCCGGCG GTAAAATTAT AGTTTATCCT
CCTAAAAACT CTGATTTTGA GCCTGATAAA AATATCCTGA TCGGAAATGT TGCCTTCTAC
GGTGCAACTT CAGGAGAGGC CTATATTAAT GGGGTTGCAG GTGAAAGGTT CTGTGTAAGA
AACAGCGGGG TTAAAGCGGT CATCGAGGGT GTTGGTGACC ATGGTTGTGA ATATATGACA
GGCGGTAAAG TTGTTGTTCT GGGTAAAACA GGAAGAAACT TTGCTGCGGG AATGTCCGGT
GGTGTAGCGT ATCTATTGGA CTTTGACGAT ATATATTGTA ACAAGTCTAT GGTGTTGCTG
GAAAAGATCG AATCAGAAGA AGAGTTAAAT GAGATCAAAT CCATGATTGA AAAGCATGTT
GAGCATACCG GCAGTCCTTT GGGTAAGAAG GTTCTCAATG ATTGGGCAGG CCATTTACAG
AGATTCACCA AGGTAATACC TAAGGATTAC AAACTTATGC TGGAAAACAT TGATAAAGCA
TACAAGGCGG GCTTTAGCGG TGAGGAAGCT TTAATGGTCG CGTTCGAAGA GAGGTTTAAA
AGCTAA
 
Protein sequence
MQQSYGLPRR QGLYDPAFEH DACGMGFVVN INGERSHDII DQALTVLENL SHRGASGADE 
NTGDGAGILI QIPHDFFKRE SEVIGFDLPE QGSYGVGMIF AHKYDDFRKT QMETFEKIVR
EEGQKILGWR EVPVDKAIIG ESAKAVMPRF VQVFISKDAG IKDEMDFERK LYTIRKRAEK
VIVPMCEDKG GAFYIASLSS KTIVYKGMLT AEQLRNFYLD LADLDFVSAL AMIHSRFSTN
TFPSWERAHP NRYLVHNGEI NTIRGNVNWM KARQKCIDSP LFDDISKVYP IVDETGSDSA
MFDNSLEFLH LTGRSLPHAV MMMIPEPWER NELMSQEKKD FYKFHDFLME PWDGPAAMAF
TDGVVIGGVL DRNGLRPSRY YVTKDDRVVM ASEVGVMDIK PENVKYKGRL EPGRMLLIDT
EQKRIISDEE LKRSVSMSQP YVEWNSRHII PLCNIPVEKV KEESVKGELV KRQKAFGYTY
EDIKSIIQPM AVTGVDPVGA MGMDSPLAVL SEKPQMLYLY FKQLFAQVTN PPIDGIREEI
ITSSSILLGN SGNLLDPDRE NTASIALEHP ILTNEQLNTI KQLNNDKFKA ATISILYNMS
KGARAMERAL DRIFKEADKA IREGANIIIL SDRGVNESLA PIPALLASSG LHQHLIRKEI
RTNVGIVLES GEPREVHHFC TLIGYGVTAI NPYLAYETIK ELAEKGLLEG KTYEDGIKNF
IKASVKGMLK VLTKMGISTI KSYHGAQIFE AVGLRKDLID RYFTFTPSRV EGIGLEEIAT
ENQLRHESAY LENSPYAGTL EVGGYFQCKD DGEVHMYNPE TIYQLQRACR EGDYSLYKDF
SRKINDEEIY TLRNLLDFKY DTGDTIPIEE VEPVEAIVRR FKTGAMSYGS ISKEAHECLA
IAMNRLGGKS NTGEGGEDIE RFKVMDNGDS KKSAIKQVAS GRFGVTSNYL VNSQEIQIKM
AQGAKPGEGG QLPGRKVYPA IARVRHSTPG VDLISPPPHH DIYSIEDLAE LIHDLKNANK
DALINVKLVS EVGVGTIAAG VAKGKADVIL ISGYDGGTGA SPRTSIRNAG LPWELGLAET
HQTLVLNKLR DRVVLETDGK MLSGRDVIIA AMLGAEEYGF ATTPLIALGC VMMRVCNLNT
CPVGIATQNE KLRKNFTGKP EHVENYMRFV AQEMREIMAK LGFRTIDEMV GRTDKLKHKE
NTKHWKAATV DLSRVLYQPY AGADVGRFHS QAQNHGLDKS LDMKRLLRMC KPALENGKSI
RAKIKINNTD RVVGTIIGSE ISKRYGENGL PEDTIKLTFV GSAGQSFGAF IPKGMSLELE
GDANDYLGKG LSGGKIIVYP PKNSDFEPDK NILIGNVAFY GATSGEAYIN GVAGERFCVR
NSGVKAVIEG VGDHGCEYMT GGKVVVLGKT GRNFAAGMSG GVAYLLDFDD IYCNKSMVLL
EKIESEEELN EIKSMIEKHV EHTGSPLGKK VLNDWAGHLQ RFTKVIPKDY KLMLENIDKA
YKAGFSGEEA LMVAFEERFK S