Gene Dtox_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3730 
Symbol 
ID8430738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3898333 
End bp3899478 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content40% 
IMG OID645035956 
Productintegrase family protein 
Protein accessionYP_003193061 
Protein GI258516839 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000165595 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGAA GTATTGTAAA AAGAGGTAAA ACATACTCCA TAGTTTATGA CATAAATCAG 
GGCGGGAAAA GAAAGCAAAA GTGGGAAAGT GGTTTTAAAA CTAAAAAAGA AGCTGAGGCA
ATACTAGCTC AAAGAATTAA CGAGATTGAA AAAGGTACAT ATATAAACCC TAAAAAAGAT
ACACTGGAGG ATTACCTAAT AAGATGGTTT GATACTCATA AGGCAGACCT CTCACCTTCT
ACAGCTCGCA GATATGAAGG GATAATAAAG CAACATCTTA TCCCTTCCCT GGGTAATATA
CCACTTGCAA AACTTCAACC CCTGCAAATA CAGGAGTTTT TATCTAAAGA ATTGGAAGGT
GGGCGACAAG ACAATAAAAA AACAGTTGGA GCCGGTTTAT CAGCAGCCAG TGTTAATTAC
GAATACCGTG TATTGCATAA AGCATTAAAC CAGGCTGTTG ACTGGCAGTT AATTAGTAGG
AACCCGGCAG ATCTTGTTAA AGTTCCGAAA CCAGAAAAGA AAGATATGGT TGTCTTATCA
GAGCAGGACA TTGCCCGGTT GCTAAATGAG ATTAAAGACA ATTATTTATA CATACCTACC
TTTCTAGCTA TATATACCGG TATGCGCTTA GGTGAAGTGC TGGGATCAAC ATGGAAAGAT
ATCGACTTAA ACCGCGGCAT TTTAAGTGTA AGGCAAGCAA GTTGCCAGGT TAAAGCAGAT
GACCCGGAAT TTAAAGCACC AAAGACAGCT AAGAGTAAAA GAAATATTGA TATTAGTCAA
ACTGTAGTAA AAACATTGAG AGAACACAAA AAAACACAGA CAAAATGGAA GCTGGTTGCA
GGTTCAAACT GGCAGGATAA TAACCTTGTG TGCGCCCTCC AAGACGGTAG GCCGATCAAT
CCCCCATCGT TATCAAGTTA CTTCCGAAGA GTGGCAAGCC GTATCGGATT ATTTGTAAGT
TTTCACGCAC TAAGACATAC CCATGCAAGC CTACTACTAA AGGCCGGCAT TCAACCTAAG
ATAGTACAAG AAAGATTAGG TCACAGCACC ATAGCAGTAA CAATGGATAT ATACAGTCAC
GTTATGCCGG GTATGCAGCG GCAAGCTGCT AACAAGCTGG ATGATATGCT TAAAATCGGT
CGTTAG
 
Protein sequence
MRGSIVKRGK TYSIVYDINQ GGKRKQKWES GFKTKKEAEA ILAQRINEIE KGTYINPKKD 
TLEDYLIRWF DTHKADLSPS TARRYEGIIK QHLIPSLGNI PLAKLQPLQI QEFLSKELEG
GRQDNKKTVG AGLSAASVNY EYRVLHKALN QAVDWQLISR NPADLVKVPK PEKKDMVVLS
EQDIARLLNE IKDNYLYIPT FLAIYTGMRL GEVLGSTWKD IDLNRGILSV RQASCQVKAD
DPEFKAPKTA KSKRNIDISQ TVVKTLREHK KTQTKWKLVA GSNWQDNNLV CALQDGRPIN
PPSLSSYFRR VASRIGLFVS FHALRHTHAS LLLKAGIQPK IVQERLGHST IAVTMDIYSH
VMPGMQRQAA NKLDDMLKIG R